| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227081493
Identifier: 227081493
GI number: 227081493
Start: 1365344
End: 1365559
Strand: Reverse
Name: 227081493
Synonym: VCM66_1277
Alternate gene names: NA
Gene position: 1365559-1365344 (Counterclockwise)
Preceding gene: 227081494
Following gene: 227081491
Centisome position: 47.21
GC content: 45.83
Gene sequence:
>216_bases ATGGAAAGGAGAAGAGAGATGACGTATCTACTGGCTTTCGGTGCCTTTGTGCTCTTTGCGGTTTTAATGACGTTAGGGGT GATGGCTAAGCGCAAACCGATTCAGGGCAGTTGCGGTGGGCTGGCTAACGTAGGGATTGATAAAGAGTGTAATTGTGAAA CCACTTGCGATACTCATCAGCGCAAGCTTTACCAAATTTCCGAACCCAAAAAATAA
Upstream 100 bases:
>100_bases GAGGATGTGGTAAACACAGTAGCAATCCTTCAGGCTCGCGTAACACATTCGTTTCGCCATCGACACACCTGTTTCAGCGT GGGTTTTCCATCAAACGGTT
Downstream 100 bases:
>100_bases GCCCCCTCTGCAGCTTCAAGCAGGCAAGACATAAACGATTAGGCAGGAAATCTCCTGCCTTAATCTTATTGTGCTTATAT TTATTGTGTGCTTGAGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MERRREMTYLLAFGAFVLFAVLMTLGVMAKRKPIQGSCGGLANVGIDKECNCETTCDTHQRKLYQISEPKK
Sequences:
>Translated_71_residues MERRREMTYLLAFGAFVLFAVLMTLGVMAKRKPIQGSCGGLANVGIDKECNCETTCDTHQRKLYQISEPKK >Mature_71_residues MERRREMTYLLAFGAFVLFAVLMTLGVMAKRKPIQGSCGGLANVGIDKECNCETTCDTHQRKLYQISEPKK
Specific function: Unknown
COG id: COG2991
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7999; Mature: 7999
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRREMTYLLAFGAFVLFAVLMTLGVMAKRKPIQGSCGGLANVGIDKECNCETTCDTHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RKLYQISEPKK HHHHCCCCCCC >Mature Secondary Structure MERRREMTYLLAFGAFVLFAVLMTLGVMAKRKPIQGSCGGLANVGIDKECNCETTCDTHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RKLYQISEPKK HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA