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The map label for this gene is ycjF [C]

Identifier: 227081478

GI number: 227081478

Start: 1346281

End: 1347300

Strand: Direct

Name: ycjF [C]

Synonym: VCM66_1262

Alternate gene names: 227081478

Gene position: 1346281-1347300 (Clockwise)

Preceding gene: 227081477

Following gene: 227081479

Centisome position: 46.54

GC content: 51.08

Gene sequence:

>1020_bases
ATGAGCGATCTTAAAACCAAACAGATTTTTAGCGAGCCACTGCAAGGTAGTTTAGAAACGCCGAGCTTGACGGCTCAGCA
GCAGTTCAGCGCACAAGAAAAGTTTGTGCCCATGAACATGGAAGTGCCAGCAGAAGAGGCATTGGAAGCTGAACTCGACA
CCATCATTCGACCCAGCAAAGGGCGCAAATGGTTTGCCGGTGGCTTGTTTGCGGCTTTCAGTGGTTTGGTCGCATGGCAG
GCTATCGATAGCGTGGTACAAGCCATTCAAGATTTGGACTGGCTCAGCCTAGGATGGGTGGGGTTTATCAGTGCTTTGGC
GACGTTAGGGTTAGGCGCTATCGCGAAAGAGTTGTGGAAACTGCGTCGTCTACGTCAGCATTTTAGTGTTCAAGAACAAG
CGCAAATCTTAATGGAGAATGATGCAGTTTGCCAAGGTCAAGCGTTCTGTGAGCAGATAGCCAAACAAGGTAAAGTGGAT
AAGCAGGGCTACCAACGTTGGCTATCGGCACTCAATAGTAGCCACAGTGATGCAGAAATTCTCGATTTGTACGACGCGTT
GGTGGTGGGTGAGCAAGATAAACAAGCCAGCCAAATTGTCACTCGTTATGCGACTGAAGCGGCCGCGTTAGTGGCGATTA
GCCCACTCGCGATTGCTGATATGTTGCTGGTGGCTTGGCGTAACTTTTCCATGGTGGATCAACTGGCAAAAGTGTATGGC
GTTGAACTCGGTTACTGGTCACGCATAAAACTGTTTAAAGCCGTATTGCTCAACATGGCGTTAGCGGGGGCGAGTGAATT
GGCTGTTGATGCCAGCGTGGATCTGTTTTCCATGGACTTGGCCGGACGCCTTTCTGCCCGTGCAGGGCAGGGGGTAGGCG
TGGGTATTCTGACCGCACGTTTGGGCATTAAAGCGGTAGGGTTGCTGCGTCCACTGCCATGGCACCCCGATCGTCAACTC
AAACTGAGTGCGGTTCGTAAGCAAGTCGTGAGTAAAGTGGCTGCTTTGCTCGCCAAATAA

Upstream 100 bases:

>100_bases
ATTTTACGGCGTTTCGTCCACTGCCCACGGCGATGGATGAGCCATGCCAGCACATTCGAGTCGATAAAGCCCTCGACATT
CTGATTGGAGATAAACTGCG

Downstream 100 bases:

>100_bases
CCTTTCATTCTCGGAAACTGCGATCCGTTATCACGGATCGCTTGACGCCGATCTGGGCTTGGGCGAAACTACTGTCAACT
TTTCGTGACACTTTCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSDLKTKQIFSEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTIIRPSKGRKWFAGGLFAAFSGLVAWQ
AIDSVVQAIQDLDWLSLGWVGFISALATLGLGAIAKELWKLRRLRQHFSVQEQAQILMENDAVCQGQAFCEQIAKQGKVD
KQGYQRWLSALNSSHSDAEILDLYDALVVGEQDKQASQIVTRYATEAAALVAISPLAIADMLLVAWRNFSMVDQLAKVYG
VELGYWSRIKLFKAVLLNMALAGASELAVDASVDLFSMDLAGRLSARAGQGVGVGILTARLGIKAVGLLRPLPWHPDRQL
KLSAVRKQVVSKVAALLAK

Sequences:

>Translated_339_residues
MSDLKTKQIFSEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTIIRPSKGRKWFAGGLFAAFSGLVAWQ
AIDSVVQAIQDLDWLSLGWVGFISALATLGLGAIAKELWKLRRLRQHFSVQEQAQILMENDAVCQGQAFCEQIAKQGKVD
KQGYQRWLSALNSSHSDAEILDLYDALVVGEQDKQASQIVTRYATEAAALVAISPLAIADMLLVAWRNFSMVDQLAKVYG
VELGYWSRIKLFKAVLLNMALAGASELAVDASVDLFSMDLAGRLSARAGQGVGVGILTARLGIKAVGLLRPLPWHPDRQL
KLSAVRKQVVSKVAALLAK
>Mature_338_residues
SDLKTKQIFSEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTIIRPSKGRKWFAGGLFAAFSGLVAWQA
IDSVVQAIQDLDWLSLGWVGFISALATLGLGAIAKELWKLRRLRQHFSVQEQAQILMENDAVCQGQAFCEQIAKQGKVDK
QGYQRWLSALNSSHSDAEILDLYDALVVGEQDKQASQIVTRYATEAAALVAISPLAIADMLLVAWRNFSMVDQLAKVYGV
ELGYWSRIKLFKAVLLNMALAGASELAVDASVDLFSMDLAGRLSARAGQGVGVGILTARLGIKAVGLLRPLPWHPDRQLK
LSAVRKQVVSKVAALLAK

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=344, Percent_Identity=39.8255813953488, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 36980; Mature: 36849

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLKTKQIFSEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTIIRPSK
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
GRKWFAGGLFAAFSGLVAWQAIDSVVQAIQDLDWLSLGWVGFISALATLGLGAIAKELWK
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRLRQHFSVQEQAQILMENDAVCQGQAFCEQIAKQGKVDKQGYQRWLSALNSSHSDAEI
HHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHH
LDLYDALVVGEQDKQASQIVTRYATEAAALVAISPLAIADMLLVAWRNFSMVDQLAKVYG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
VELGYWSRIKLFKAVLLNMALAGASELAVDASVDLFSMDLAGRLSARAGQGVGVGILTAR
CCCCHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LGIKAVGLLRPLPWHPDRQLKLSAVRKQVVSKVAALLAK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLKTKQIFSEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTIIRPSK
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC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HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]