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The map label for this gene is ycjX [H]

Identifier: 227081477

GI number: 227081477

Start: 1344911

End: 1346284

Strand: Direct

Name: ycjX [H]

Synonym: VCM66_1261

Alternate gene names: 227081477

Gene position: 1344911-1346284 (Clockwise)

Preceding gene: 227081476

Following gene: 227081478

Centisome position: 46.5

GC content: 51.46

Gene sequence:

>1374_bases
ATGCAGCGTATTCGTCAAGAAATGAGCGACTTTATCCATCGTGGCCTCGATTCTCATGTCCGTCTTGCGGTGACGGGACT
TTCGCGCGCAGGTAAAACGGCGTTTATTACCTCTCTCGTCAATCAACTGCTGCATACGTCCAGCCATCATAATCTCCCTC
TGTTAGCGGCGGATCGTGAGCAGCGCTTGATTGGCGCAAAGCGTGTGCCGCAAAGCAACATGATGGTGCCACGCTTTGCC
TATGATGAAGCGTTAACCGAGTTGCAAAGCAGCCCTGCAAACTGGCCAGTGCCAACCCGAGATGTAAGCGAAATTCGTTT
GGCGATCAAATACAAGCCGAAAAAACGCAGCAAAAAGCTACTCACCAGTAGTGCAACTCTCTATCTCGACATTATCGACT
ATCCCGGAGAGTGGTTGCTCGATTTACCGCTATTAGAGATGGATTACGCCACTTGGTCAGCACAGCAATTTCATGCTCTG
CATGGGTTACGCAAAGAGCTCGCTAAGCCTTGGTGTGACGCTGTGGAGCAGCTTGATCTTCACCAAGAAGCTAATGAGCA
AACCTTGGCGGCGATTGCCGCGAGTTACACCGACTATCTGCATCAATGTAAAGCCAGTGGACTGCATTGGGTTCAGCCGG
GACGATTTGTGTTGCCAGGGGAGCTGGAAGGTGCGCCTGTGCTGCAATTTTTCCCGTGTCATGCGCCGCAGGGCTCAGTG
AGCAAGCAGAGCTATTACGCTTTGCTGCAAGCGCGCTATCAGGAGTACCAAAACAAGGTGGTAAAAGCCTTTTATAAGGA
CTATTTCGCGACGTTTGATCGCCAGATTGTGTTGGTGGATTGCCTATCGCCGCTCAATGTTGGGCACGAATCGTTTTTGG
ATATGCGCAGCGCGCTGGAGCAAATCATGCACAGTTTCCGCTATGGGCGCAGTGGTTTGCTCAGCCGTTTATTTGCACCC
AAAATCGATAAAGTCGTCTTTGCGGCTACTAAGGCTGACCATGTAACACCGGAGCAGCATGTCAATATGGTTTCTCTATT
GCAGCAGATGATCCATCCGGCATGGCAGCATGCAGCCTATGAAAATATTGAAATGAACTGCATCAGCATGGCTTCGGTGC
GCGCCACGCAGTCAGGTTACATCATGCAGGGAGAGCAGAAGGTGGCGGCGATTCAAGGTATCACTCTGGAAGGTGAATCC
ATCACGCTCTTTCCCGGTGAGGTGCCGCGCAAACTGCCAGATCCCGATTATTGGCAGCGTCAGGCGTTTGATTTTACGGC
GTTTCGTCCACTGCCCACGGCGATGGATGAGCCATGCCAGCACATTCGAGTCGATAAAGCCCTCGACATTCTGATTGGAG
ATAAACTGCGATGA

Upstream 100 bases:

>100_bases
GGTAGTCAGCACTGCTGCCACTTTAAGTAGGAAGGGTATATTCATCTCACATTAAGCTTGAGTTTATTAAGCTGTGCGAA
ATCCTGATTTGGAGTGAACA

Downstream 100 bases:

>100_bases
GCGATCTTAAAACCAAACAGATTTTTAGCGAGCCACTGCAAGGTAGTTTAGAAACGCCGAGCTTGACGGCTCAGCAGCAG
TTCAGCGCACAAGAAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MQRIRQEMSDFIHRGLDSHVRLAVTGLSRAGKTAFITSLVNQLLHTSSHHNLPLLAADREQRLIGAKRVPQSNMMVPRFA
YDEALTELQSSPANWPVPTRDVSEIRLAIKYKPKKRSKKLLTSSATLYLDIIDYPGEWLLDLPLLEMDYATWSAQQFHAL
HGLRKELAKPWCDAVEQLDLHQEANEQTLAAIAASYTDYLHQCKASGLHWVQPGRFVLPGELEGAPVLQFFPCHAPQGSV
SKQSYYALLQARYQEYQNKVVKAFYKDYFATFDRQIVLVDCLSPLNVGHESFLDMRSALEQIMHSFRYGRSGLLSRLFAP
KIDKVVFAATKADHVTPEQHVNMVSLLQQMIHPAWQHAAYENIEMNCISMASVRATQSGYIMQGEQKVAAIQGITLEGES
ITLFPGEVPRKLPDPDYWQRQAFDFTAFRPLPTAMDEPCQHIRVDKALDILIGDKLR

Sequences:

>Translated_457_residues
MQRIRQEMSDFIHRGLDSHVRLAVTGLSRAGKTAFITSLVNQLLHTSSHHNLPLLAADREQRLIGAKRVPQSNMMVPRFA
YDEALTELQSSPANWPVPTRDVSEIRLAIKYKPKKRSKKLLTSSATLYLDIIDYPGEWLLDLPLLEMDYATWSAQQFHAL
HGLRKELAKPWCDAVEQLDLHQEANEQTLAAIAASYTDYLHQCKASGLHWVQPGRFVLPGELEGAPVLQFFPCHAPQGSV
SKQSYYALLQARYQEYQNKVVKAFYKDYFATFDRQIVLVDCLSPLNVGHESFLDMRSALEQIMHSFRYGRSGLLSRLFAP
KIDKVVFAATKADHVTPEQHVNMVSLLQQMIHPAWQHAAYENIEMNCISMASVRATQSGYIMQGEQKVAAIQGITLEGES
ITLFPGEVPRKLPDPDYWQRQAFDFTAFRPLPTAMDEPCQHIRVDKALDILIGDKLR
>Mature_457_residues
MQRIRQEMSDFIHRGLDSHVRLAVTGLSRAGKTAFITSLVNQLLHTSSHHNLPLLAADREQRLIGAKRVPQSNMMVPRFA
YDEALTELQSSPANWPVPTRDVSEIRLAIKYKPKKRSKKLLTSSATLYLDIIDYPGEWLLDLPLLEMDYATWSAQQFHAL
HGLRKELAKPWCDAVEQLDLHQEANEQTLAAIAASYTDYLHQCKASGLHWVQPGRFVLPGELEGAPVLQFFPCHAPQGSV
SKQSYYALLQARYQEYQNKVVKAFYKDYFATFDRQIVLVDCLSPLNVGHESFLDMRSALEQIMHSFRYGRSGLLSRLFAP
KIDKVVFAATKADHVTPEQHVNMVSLLQQMIHPAWQHAAYENIEMNCISMASVRATQSGYIMQGEQKVAAIQGITLEGES
ITLFPGEVPRKLPDPDYWQRQAFDFTAFRPLPTAMDEPCQHIRVDKALDILIGDKLR

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1637 [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=53.5483870967742, Blast_Score=514, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 51914; Mature: 51914

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIRQEMSDFIHRGLDSHVRLAVTGLSRAGKTAFITSLVNQLLHTSSHHNLPLLAADRE
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCH
QRLIGAKRVPQSNMMVPRFAYDEALTELQSSPANWPVPTRDVSEIRLAIKYKPKKRSKKL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCHHHHHHH
LTSSATLYLDIIDYPGEWLLDLPLLEMDYATWSAQQFHALHGLRKELAKPWCDAVEQLDL
HHCCCEEEEEEECCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQEANEQTLAAIAASYTDYLHQCKASGLHWVQPGRFVLPGELEGAPVLQFFPCHAPQGSV
HHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCEEEEECCCCCCCCC
SKQSYYALLQARYQEYQNKVVKAFYKDYFATFDRQIVLVDCLSPLNVGHESFLDMRSALE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
QIMHSFRYGRSGLLSRLFAPKIDKVVFAATKADHVTPEQHVNMVSLLQQMIHPAWQHAAY
HHHHHHHCCHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENIEMNCISMASVRATQSGYIMQGEQKVAAIQGITLEGESITLFPGEVPRKLPDPDYWQR
CCCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCEEECCCEEEECCCCCCCCCCCCCHHHH
QAFDFTAFRPLPTAMDEPCQHIRVDKALDILIGDKLR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQRIRQEMSDFIHRGLDSHVRLAVTGLSRAGKTAFITSLVNQLLHTSSHHNLPLLAADRE
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCH
QRLIGAKRVPQSNMMVPRFAYDEALTELQSSPANWPVPTRDVSEIRLAIKYKPKKRSKKL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCHHHHHHH
LTSSATLYLDIIDYPGEWLLDLPLLEMDYATWSAQQFHALHGLRKELAKPWCDAVEQLDL
HHCCCEEEEEEECCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQEANEQTLAAIAASYTDYLHQCKASGLHWVQPGRFVLPGELEGAPVLQFFPCHAPQGSV
HHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCEEEEECCCCCCCCC
SKQSYYALLQARYQEYQNKVVKAFYKDYFATFDRQIVLVDCLSPLNVGHESFLDMRSALE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
QIMHSFRYGRSGLLSRLFAPKIDKVVFAATKADHVTPEQHVNMVSLLQQMIHPAWQHAAY
HHHHHHHCCHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENIEMNCISMASVRATQSGYIMQGEQKVAAIQGITLEGESITLFPGEVPRKLPDPDYWQR
CCCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCEEECCCEEEECCCCCCCCCCCCCHHHH
QAFDFTAFRPLPTAMDEPCQHIRVDKALDILIGDKLR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]