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The map label for this gene is 227081452

Identifier: 227081452

GI number: 227081452

Start: 1312826

End: 1314121

Strand: Reverse

Name: 227081452

Synonym: VCM66_1235

Alternate gene names: NA

Gene position: 1314121-1312826 (Counterclockwise)

Preceding gene: 227081459

Following gene: 227081450

Centisome position: 45.43

GC content: 44.91

Gene sequence:

>1296_bases
ATGGATACTAAGATGAAATTAAAAAAATTGGCTCTATTTACCGCGATATCGTTAGCCATTTCTGGTCATTCTTTTGCAAA
CAGTACCCCTAAGGGCACGATTTATTTAACTTTTGATGATGGCCCGGTCAATGCGTCAGTAGAAGTCATTAAGGTTCTAA
ACCAAGGCGGGGTAAAAGCCACTTTTTATTTTAACGCTTGGCACTTGGATGGTATCGGTGATGAAAATGAAGATCGTGCT
CTAGAGGCTCTAAAGTTAGCTCTAGATTCAGGTCATATTGTCGGCAACCACAGCTACGATCATATGATTCATAACTGTGT
GGAAGAGTTTGGCCCCACCAGTGGCGCAGATTGTAATGCAACCGGTAACCATCAAATCCACTCGTATCAAGATCCCGTTC
GTGATGCGGCCAGTTTTGAGCAAAACTTGATCACATTAGAAAAATACCTGCCTACTATTCGTAGCTATCCAAACTACAAG
GGGTATGAGTTAGCTCGCCTACCCTATACCAACGGTTGGCGTGTCACAAAGCACTTCCAAGCTGATGGTTTATGCGCGAC
ATCCGACAATTTAAAACCTTGGGAGCCGGGTTATGTGTGCGATCCAGCTAACCCATCAAACAGTGTGAAAGCCTCGATTC
AAGTACAGAATATTCTTGCTAATCAAGGCTATCAAACTCACGGATGGGATGTGGATTGGGCCCCCGAAAACTGGGGTATT
CCTATGCCTGCCAACAGCTTAACCGAAGCCGTTCCCTTTTTGGCCTATGTGGATAAAGCCTTAAATAGTTGCTCACCAAC
CACTATCGAACCAATTAACTCGAAAACACAAGAGTTCCCTTGTGGCACCCCACTGCACGCCGATAAAGTGATTGTGCTCA
CCCATGATTTCTTATTTGAAGATGGCAAACGCGGTATGGGAGCGACACAAAACTTACCTAAACTTGCCGAGTTTATCCGG
ATTGCCAAAGAAGCAGGTTATGTTTTCGATACGATGGATAATTACACTCCTCGTTGGAGCGTAGGTAAAACGTATCAAGC
GGGAGAATATGTTCTGTACCAAGGTGTGGTGTATAAAGCGGTCATTAGTCACACTGCGCAACAGGATTGGGCTCCATCAT
CCACGTCAAGCCTTTGGACCAACGCCGACCCTGCGACAAACTGGACACTCAATGTCTCCTATGAGCAAGGCGACATCGTC
AATTACAAAGGTAAACGCTATTTAGTCAGTGTCCCACATGTTTCACAACAAGACTGGACACCAGACACTCAGAACACCTT
ATTCACAGCTTTATAA

Upstream 100 bases:

>100_bases
TAGGATAATGAGAAGAAATATATAAGCCTACCAGATGGACTTGTTATTTCTATCAATATAAATACTAGCAACGTCACTCT
TAAATTTCTGATTTAAAATA

Downstream 100 bases:

>100_bases
AAAGCTGCTCCTATAGCCAACCTGCAGATTCAAGTAGGGATGGTATCTCTATCGTCAGATAGTTTGCGCGGAGAGCTCTC
CGCGCTTTTTTTGAACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDTKMKLKKLALFTAISLAISGHSFANSTPKGTIYLTFDDGPVNASVEVIKVLNQGGVKATFYFNAWHLDGIGDENEDRA
LEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYK
GYELARLPYTNGWRVTKHFQADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGI
PMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFEDGKRGMGATQNLPKLAEFIR
IAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIV
NYKGKRYLVSVPHVSQQDWTPDTQNTLFTAL

Sequences:

>Translated_431_residues
MDTKMKLKKLALFTAISLAISGHSFANSTPKGTIYLTFDDGPVNASVEVIKVLNQGGVKATFYFNAWHLDGIGDENEDRA
LEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYK
GYELARLPYTNGWRVTKHFQADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGI
PMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFEDGKRGMGATQNLPKLAEFIR
IAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIV
NYKGKRYLVSVPHVSQQDWTPDTQNTLFTAL
>Mature_431_residues
MDTKMKLKKLALFTAISLAISGHSFANSTPKGTIYLTFDDGPVNASVEVIKVLNQGGVKATFYFNAWHLDGIGDENEDRA
LEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYK
GYELARLPYTNGWRVTKHFQADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGI
PMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFEDGKRGMGATQNLPKLAEFIR
IAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIV
NYKGKRYLVSVPHVSQQDWTPDTQNTLFTAL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47831; Mature: 47831

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKMKLKKLALFTAISLAISGHSFANSTPKGTIYLTFDDGPVNASVEVIKVLNQGGVKA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEE
TFYFNAWHLDGIGDENEDRALEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNA
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCC
TGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPYTNGWRVTKHFQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEC
ADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGI
CCCEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCC
PMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEHHHHC
DGKRGMGATQNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKA
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
VISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWT
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCCC
PDTQNTLFTAL
CCCCCEEEECC
>Mature Secondary Structure
MDTKMKLKKLALFTAISLAISGHSFANSTPKGTIYLTFDDGPVNASVEVIKVLNQGGVKA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEE
TFYFNAWHLDGIGDENEDRALEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNA
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCC
TGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPYTNGWRVTKHFQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEC
ADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGI
CCCEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCC
PMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEHHHHC
DGKRGMGATQNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKA
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
VISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWT
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCCC
PDTQNTLFTAL
CCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA