| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is mdoG
Identifier: 227081459
GI number: 227081459
Start: 1322009
End: 1323646
Strand: Reverse
Name: mdoG
Synonym: VCM66_1243
Alternate gene names: 227081459
Gene position: 1323646-1322009 (Counterclockwise)
Preceding gene: 227081461
Following gene: 227081452
Centisome position: 45.76
GC content: 48.35
Gene sequence:
>1638_bases ATGATTCGTGTGTCCAGCGCCGTGCAACGTCATGCGCAAAAACTGATTGTACTTTTCTCCCTGCTGTTTGGGGCTTCTTT GCTGATGTCTGATAATGGTTTTGCTACAGACATTAAAAATACTAATGCCTCTTCTCCAGTGAATTCAGAGTCTACTAAGC CAACAAAAGCTGGCGAAGTTAAAAATGTGGTTCGCTTTGCCAAAACGGGATCGTTTGATAACGACACCGTTGTTCGCCTA GCTCGCCAACTGGCGAAAAAGCCTTATGTTGCCTTAAAAGATCCGCTACCAGAGAGTTTGGCCAATATCAGTTATGATGA GTACCGCGATATTCGTTTTAAACCCGACAGTGCAGTGTGGAAAGCAGATGGCCTACCATATCAAATGCAACTATTCCATC GCGGTTTCTTCTTCCAAGATCTGATTGAAATTGCACTTGTTGAAGGCAACCAAGCCACTCACCTAAGTTACGACCCCAAT ATGTTCACCGCTGGCGAAGTTCTACAACAGAACCTGCCGACTGAAGATATTGGTTATAGTGGTCTTCGTGTGCATTACCC TCTCAACAGCCCATCCTATTTTGATGAACTGTTTGTATTCCAAGGAGCAAGCTACTTCCGTGCTCTGGGTAAAGGCAATG CCTATGGCTTGTCTGCGCGTGGCTTGGCCATCAAAACTGCCGATCCAGCGGGTGAAGAGTTCCCTATTTTCCGTGCCTTC TGGGTGGAAAAACCAAACTACGACACCAACTTGATTGTGGTCCATGCCCTACTGGATAGCCCAAGCGTGTCTGGTGCGTA TCGTTTCTCTATTCGTCCAGGAGAAAATACTCGTATGGACGTTGAGGCGGTACTCTTCCCACGCGTGGAGTTAAGCAAAG TTGGTCTAGCTCCGGCAACCAGTATGTTCATGCATTCGCCAAATGGCCGTGAGAAGACTGATGATTTCCGTCCTTCTGTG CATGATTCTGATGGTTTATTGATGATCAACGGACGTGGTGAACGTTTGTGGCGTCCATTGGCTAACCCTAGCACACTGCA AGTGAGCGCCTTTATGGACAACTCACCGCAAGGCTTTGGTTTGATGCAGCGTGAGCGCGATTACGCCAACTACCAAGATT TGGAAGCCCATTACGAAAAACGTCCAAGTCTGTGGGTTGAACCGGTCGGTAACTGGGGTCCTGGTGCTGTCGTGTTGACA GAAATTCCAACTCAATCAGAAATTCACGACAACATTGTCGCCTTCTGGAAGCCAGCACAACCTCTTGCAGCAGGCAGTGA ATATCGTTTCTCTTATCACCTCAACTGGGGTGCGCAACCAGAAGCGAATCCACAAGCGATCACTGTAAGCCGTACTGCGA GTGGACGTGCCGATATTGCCAAACCAACGCCAAAACGTTTGTTCGTGATTGATTACCAAGTCCAAGGTGCCAAGCCTGCA CAGATGCCAGAACCGAAAGTGCGCAGCAATGCTGGGGTAATCAGTAACGTTGTACTGCGTGATAACCCTGCCAATAATGG CTATCGCCTCTCATTTGAATTTGATCCAGGCGAAGTGACGCTGGCTGAACTACGGGCAGAGCTGACTTTGCAAGAAGCGC GTCCTGTAGAAACTTGGTTGTATCGTTGGACCCTGTAG
Upstream 100 bases:
>100_bases AATGAGACCTGCAATTTCCTGCGATACCGTCCGGTCAGCAAAATTGCAGTAAACTCTTAAGCTATCTTCGTATTTCACTT TGTTATCGGTTCATTTCTAT
Downstream 100 bases:
>100_bases TAAGTACTCGGATTTTTTATGACAAACCCAATGGTTGAACAAGGAGCCTCCCAGTTAATGGGAGGCTCTGCCATGCCACC AGAACAACACGGCGAAATGC
Product: glucan biosynthesis protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MIRVSSAVQRHAQKLIVLFSLLFGASLLMSDNGFATDIKNTNASSPVNSESTKPTKAGEVKNVVRFAKTGSFDNDTVVRL ARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVWKADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPN MFTAGEVLQQNLPTEDIGYSGLRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAF WVEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPATSMFMHSPNGREKTDDFRPSV HDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFGLMQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLT EIPTQSEIHDNIVAFWKPAQPLAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPA QMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVETWLYRWTL
Sequences:
>Translated_545_residues MIRVSSAVQRHAQKLIVLFSLLFGASLLMSDNGFATDIKNTNASSPVNSESTKPTKAGEVKNVVRFAKTGSFDNDTVVRL ARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVWKADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPN MFTAGEVLQQNLPTEDIGYSGLRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAF WVEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPATSMFMHSPNGREKTDDFRPSV HDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFGLMQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLT EIPTQSEIHDNIVAFWKPAQPLAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPA QMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVETWLYRWTL >Mature_545_residues MIRVSSAVQRHAQKLIVLFSLLFGASLLMSDNGFATDIKNTNASSPVNSESTKPTKAGEVKNVVRFAKTGSFDNDTVVRL ARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVWKADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPN MFTAGEVLQQNLPTEDIGYSGLRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAF WVEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPATSMFMHSPNGREKTDDFRPSV HDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFGLMQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLT EIPTQSEIHDNIVAFWKPAQPLAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPA QMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVETWLYRWTL
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family
Homologues:
Organism=Escherichia coli, GI1787286, Length=488, Percent_Identity=38.5245901639344, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI145693128, Length=501, Percent_Identity=36.5269461077844, Blast_Score=301, Evalue=9e-83,
Paralogues:
None
Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): OPGG_VIBC3 (A5F1Q1)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F1Q1 - SMR: A5F1Q1 - STRING: A5F1Q1 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0907 - eggNOG: COG3131 - HOGENOM: HBG349977 - OMA: YRFTIRP - ProtClustDB: PRK13273 - BioCyc: VCHO345073:VC0395_A0907-MONOMER - HAMAP: MF_01069 - InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 - PIRSF: PIRSF006281
Pfam domain/function: PF04349 MdoG; SSF74650 Gal_mut_like; SSF81296 Ig_E-set
EC number: NA
Molecular weight: Translated: 60874; Mature: 60874
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVSSAVQRHAQKLIVLFSLLFGASLLMSDNGFATDIKNTNASSPVNSESTKPTKAGEV CEECHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHH KNVVRFAKTGSFDNDTVVRLARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVW HHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHCCHHHCCCEEECCCCCEE KADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPNMFTAGEVLQQNLPTEDIGYS ECCCCCHHHHHHHCCCHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC GLRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAF CEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCEEEEE WVEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPAT EEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCEEHHHCCCCCCH SMFMHSPNGREKTDDFRPSVHDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFG HHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCC LMQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLTEIPTQSEIHDNIVAFWKPAQ CHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCEEEEECCCC PLAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPA CCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCC QMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVETWL CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCCCEE YRWTL EEECC >Mature Secondary Structure MIRVSSAVQRHAQKLIVLFSLLFGASLLMSDNGFATDIKNTNASSPVNSESTKPTKAGEV CEECHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHH KNVVRFAKTGSFDNDTVVRLARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVW HHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHCCHHHCCCEEECCCCCEE KADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPNMFTAGEVLQQNLPTEDIGYS ECCCCCHHHHHHHCCCHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC GLRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAF CEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCEEEEE WVEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPAT EEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCEEHHHCCCCCCH SMFMHSPNGREKTDDFRPSVHDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFG HHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCC LMQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLTEIPTQSEIHDNIVAFWKPAQ CHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCEEEEECCCC PLAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPA CCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCC QMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVETWL CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCCCEE YRWTL EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA