| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081332
Identifier: 227081332
GI number: 227081332
Start: 1189090
End: 1190079
Strand: Reverse
Name: 227081332
Synonym: VCM66_1115
Alternate gene names: NA
Gene position: 1190079-1189090 (Counterclockwise)
Preceding gene: 227081333
Following gene: 227081329
Centisome position: 41.14
GC content: 51.11
Gene sequence:
>990_bases ATGGGGTTCTCCTTTTCGTTCTCGGATTACACCTCCCCTTTTAAGCTACGCCGCAAAGGTATCATGGGGATGAATAAGCG TAACCACGCTTATATCGGACGTTACAACGATCGTTCCAAGTACCCTTTAGTGGATGACAAGCTCAAAACCAAGCTGATCG CTCAACGGGCTGGGTGTACGGTTCCAAAGCTCATCGGCGTGATCAGCAATCAAGCCGAAGTGAAACACATCCATGAAATG GTCAAAGACTGGCCGGGCTTTGTGATTAAGCCTGCGCGCGGCAGCGGTGGGAAAGGCATTTTAGTCGTCACCTCCCATCA AGCCGGTGTGTATACCAAACCCTCAGGTTCGAACATGAATAAAGAGGATGTGGAACGCCACATCAGCAATGCCCTCGCCG GACTTTTCTCTCTTGGCGGCAAAAACGATGTAGCCGTGGTCGAAAACTTAATTCAGTTTGATGACTGTTTTGAGGGGTTC AGCTATGAAGGCGTACCCGATGTGCGGATTATCGTGTTCAAAGGTTATCCGGTCATGGCGATGATGCGCCTCTCCACTTC CGCTTCGGATGGAAAAGCCAACTTGCACCAAGGTGCGGTCGGCGTGGGAATTGATATTGCCACCGGTAAAGCGGTGCGTG CCGTGCAATTTAATAAACCCGTTACTCATCACCCCGATACAGACAAAGAGCTGGCCACCTTAGTTGTACCCCACTGGGAA AGACTGCTGACATTAGCAGCCAGCGCTTGGGAGATGACTGGATTAGGCTATCTCGGAACCGATATGGTACTGGATAAAGA AGAAGGCCCCATGGTGTTAGAACTCAACGCGCGTCCCGGACTCGCGATTCAGATTGCTAATGGCGCAGGACTCTTGCCTC GTTTGCAGCACATTGAAAGTTTAGGTTCTTCACTGATCTACCCAACACCCGCCGAGCGTGTAGCGTATGCAGTGCGTAAG TTTGGGGTTCACTCACCGATAGCGCAGTAA
Upstream 100 bases:
>100_bases TACAGTTGGTTGTTCTCGCGGCAATCCTACTGTTGGGAACTTACACCGGTTATCGAATTTCTGAGCTACGTCGCTTCAAG CCTTTGGTGGAGGAGAAGTA
Downstream 100 bases:
>100_bases TCCTGATTTTATTTACCGCGCCAACATGACAAAAGGCTTCCGAATGGAAGCCTTTTTCTTGATCTATCAACCACATGCCA TTAAGCGTATTGCGCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MGFSFSFSDYTSPFKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKLIAQRAGCTVPKLIGVISNQAEVKHIHEM VKDWPGFVIKPARGSGGKGILVVTSHQAGVYTKPSGSNMNKEDVERHISNALAGLFSLGGKNDVAVVENLIQFDDCFEGF SYEGVPDVRIIVFKGYPVMAMMRLSTSASDGKANLHQGAVGVGIDIATGKAVRAVQFNKPVTHHPDTDKELATLVVPHWE RLLTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLQHIESLGSSLIYPTPAERVAYAVRK FGVHSPIAQ
Sequences:
>Translated_329_residues MGFSFSFSDYTSPFKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKLIAQRAGCTVPKLIGVISNQAEVKHIHEM VKDWPGFVIKPARGSGGKGILVVTSHQAGVYTKPSGSNMNKEDVERHISNALAGLFSLGGKNDVAVVENLIQFDDCFEGF SYEGVPDVRIIVFKGYPVMAMMRLSTSASDGKANLHQGAVGVGIDIATGKAVRAVQFNKPVTHHPDTDKELATLVVPHWE RLLTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLQHIESLGSSLIYPTPAERVAYAVRK FGVHSPIAQ >Mature_328_residues GFSFSFSDYTSPFKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKLIAQRAGCTVPKLIGVISNQAEVKHIHEMV KDWPGFVIKPARGSGGKGILVVTSHQAGVYTKPSGSNMNKEDVERHISNALAGLFSLGGKNDVAVVENLIQFDDCFEGFS YEGVPDVRIIVFKGYPVMAMMRLSTSASDGKANLHQGAVGVGIDIATGKAVRAVQFNKPVTHHPDTDKELATLVVPHWER LLTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLQHIESLGSSLIYPTPAERVAYAVRKF GVHSPIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35828; Mature: 35697
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSFSFSDYTSPFKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKLIAQRAGCT CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC VPKLIGVISNQAEVKHIHEMVKDWPGFVIKPARGSGGKGILVVTSHQAGVYTKPSGSNMN HHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCC KEDVERHISNALAGLFSLGGKNDVAVVENLIQFDDCFEGFSYEGVPDVRIIVFKGYPVMA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH MMRLSTSASDGKANLHQGAVGVGIDIATGKAVRAVQFNKPVTHHPDTDKELATLVVPHWE HEEHHCCCCCCCCHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHEECHHHH RLLTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLQHIES HHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHH LGSSLIYPTPAERVAYAVRKFGVHSPIAQ HCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GFSFSFSDYTSPFKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKLIAQRAGCT CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC VPKLIGVISNQAEVKHIHEMVKDWPGFVIKPARGSGGKGILVVTSHQAGVYTKPSGSNMN HHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCC KEDVERHISNALAGLFSLGGKNDVAVVENLIQFDDCFEGFSYEGVPDVRIIVFKGYPVMA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH MMRLSTSASDGKANLHQGAVGVGIDIATGKAVRAVQFNKPVTHHPDTDKELATLVVPHWE HEEHHCCCCCCCCHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHEECHHHH RLLTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLQHIES HHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHH LGSSLIYPTPAERVAYAVRKFGVHSPIAQ HCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA