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The map label for this gene is 227081325

Identifier: 227081325

GI number: 227081325

Start: 1181136

End: 1182071

Strand: Reverse

Name: 227081325

Synonym: VCM66_1108

Alternate gene names: NA

Gene position: 1182071-1181136 (Counterclockwise)

Preceding gene: 227081327

Following gene: 227081324

Centisome position: 40.87

GC content: 44.12

Gene sequence:

>936_bases
TTGATCGTGTATTTTATGAGTCACCTATCTTTTTACTGGTTACCCGAAACCAAACATAAACTCATCCAAGGATTGGAAAG
TGAATTTGCGCAATTGGTCGAGCTTTCTATCAGTACCGGGAAAATTTCGCTTCCCCCAATTCCAGATGTCGTTTTAAAAA
TTCAGCGCCTGTGCTTAGCGGAATCGACATCCATATCCGATGTCGCGGACTGCTTAATTGAAGATCCTGGGCTCTCTGCG
ATTGTGATTCGCGTGGCGAACTCAGTTGTGTTTAATCGTCGAAACATTACGTGCACCGATATTGTCACGGCCGTTTCACG
TCTTGGCATTTTGCGCGTTCGTGATATTGTGACGGCGCAAGCTATTGAACAGTTGAAGTACTCCGTCAACCTCAGTAAAG
AGTGCAATCGCATCTTACTTAAAAGTGCGACCATTTCTCGCGAAATGGGGGCCACCATGTTACTGGTGACCCAGACATTT
AAGTGTGTGGATGCGAAGAAATACCAGTACCTTGAGCTAGAAAAGGCACTACTAGTCGGTTTGTTGGCGGATATCGGTAT
CTTCTGTCTGGTCAATGAGTACCATTTATATCTACAAAATGGTAATTATCTGGATCCCACTATTGCACTGAAGATTTTCC
AATCTCAGTGCTCACCAATCAGTCAATTGGTGTTACGTCACTGGGGATTTGATCATGACTTTTTGGAAGTCGCTTGCAAC
ACTGAGCTGGTAACCGAGCGACAAGAAGTCACTTACCTCGATATTGCTCGTATTGCTCATCACTTACTGATGTTCAGAAA
GAAAGATGATGCGATTGACGATCACAATGTCGAGATCAACTCTGAAGGCGCTGAAGTGCTCTACCAGCTCAGCAACTTAA
GTGAAATGGAATTTAACAACAAGCTAAGTGATGTGATCAGTGCCAGTGGCATCTGA

Upstream 100 bases:

>100_bases
ATCGCTCAATAGTTCAACGAAAAAACCAGCGTAATCGGTAAAATGCATGGAACCGTTTGCTTATTTAGTTTAGCGATAGT
TAAAATGCTACCAACTTTGC

Downstream 100 bases:

>100_bases
AGTACCACTGTGAGGATGTTATGCTGTCAGGGATGATCTTTGTTTTTGCACCACTCGTGGTGGGTTACCTATTCATTATT
CGTAACCCATCTCATCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Hdod Domain Family Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA
IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF
KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN
TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI

Sequences:

>Translated_311_residues
MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA
IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF
KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN
TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI
>Mature_311_residues
MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSA
IVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTF
KCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN
TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNNKLSDVISASGI

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35057; Mature: 35057

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLA
CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
ESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQ
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHH
LLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN
HHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCC
TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNN
CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHH
KLSDVISASGI
HHHHHHHCCCC
>Mature Secondary Structure
MIVYFMSHLSFYWLPETKHKLIQGLESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLA
CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
ESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQ
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHH
LLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN
HHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCC
TELVTERQEVTYLDIARIAHHLLMFRKKDDAIDDHNVEINSEGAEVLYQLSNLSEMEFNN
CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHH
KLSDVISASGI
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA