| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ackA-1
Identifier: 227081271
GI number: 227081271
Start: 1125185
End: 1126381
Strand: Reverse
Name: ackA-1
Synonym: VCM66_1054
Alternate gene names: 227081271
Gene position: 1126381-1125185 (Counterclockwise)
Preceding gene: 227081273
Following gene: 227081270
Centisome position: 38.94
GC content: 50.54
Gene sequence:
>1197_bases ATGTCTAAGCTGGTTTTAGTTTTAAACTGCGGTAGTTCTTCACTTAAGTTCGCAGTTGTTGACGCTCAAAGCGGTGAACA ACATCTTTCAGGTCTCGCTGAATGTTTACACCTTCCTGAAGCTCGTATCAAGTGGAAATTGGACGGCAAGCACGAAGCTC AACTGGGCGAAGGCGCTGCACACGATGAAGCTCTGTCTTTCATCGTTGAAACTATTCTTGCTTCTAAACCAGAACTGGCA GCTCAACTGAAAGCGATCGGTCACCGCGTGGTACACGGTGGTGAGCAGTTCACTCAATCTGCACTGATTGACGACGCTGT ACTGAAAGGCATCGAAGATTGTGCAGCACTCGCTCCACTGCACAACCCAGCACACATCATCGGTATCAAAGCGGCGCAAA AAGCGTTCCCAGAGCTGAAAAATGTTGCGGTATTCGACACTGCGTTCCACCAAACAATGCCAGAAGAAGCGTACCTGTAC GCTCTGCCATACAACCTGTACAAAGAGCACGGTATTCGTCGCTACGGCATGCACGGTACGTCTCACCTGTTCATCGCACG TGAAGCGGCTGAGCGTCTGGGCAAACCTGCAAACGAACTGAACATCATCAACTGCCACCTAGGCAACGGTGCTTCTGTGT GTGCGATCAAAAACGGCCAATCGGTTGACACATCTATGGGTCTGACTCCACTGGAAGGTCTGGTGATGGGTACTCGTTGT GGTGATATCGATCCTGCGATCATTTTCCACCTGCACGACACGCTGGGTTACTCAGTTGAGAAAATCAACACCATGCTGAC CAAAGAATCGGGTCTGTTGGGTCTGACTGAAGTGACTTCTGACTGCCGTTTCGTTGAAGACAACTACGGCCAAAAAGAAG AAGCAACTCGCGCAATGGACGTATTCTGTCACCGCCTAGCGAAATACGTTGCTGGCTACACAGCAAGCCTAGACGGCCGT CTGGACGCGATCACCTTCACTGGTGGTATCGGTGAAAACTCTGCGCCAATCCGTGAAATGGTTCTGAACCGTCTAGCGAT TTTCGGTATCACCGTTGACAGCGCAGCAAACCTGAAAGCCCGTTTCGGCGGTGAAGGTGTGATCACCACTGCAGACAGCC GTATCCCAGCGATGGTTATCGCGACTAACGAAGAGTTAGTGATTGCAGAAGATACAGCTCGTCTGACGAACATCTAA
Upstream 100 bases:
>100_bases TTGACGTTTTATTGACCGAGATTAGGGCGCATTCATCGAGGCGTCATCTACTCTTGGTACTGATTTTTTTATCCCAACCG ATTATTACAGGTAGTCACTC
Downstream 100 bases:
>100_bases TACGACTTACACTGGCTAACTCAGGTTAGCCAGTGTCATTTAGGGGCTCAGCGTAAGCCTGTCCTGCGTTTGAGCTTTGT CACTTTCAATCTAAGCACCT
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase 1
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSKLVLVLNCGSSSLKFAVVDAQSGEQHLSGLAECLHLPEARIKWKLDGKHEAQLGEGAAHDEALSFIVETILASKPELA AQLKAIGHRVVHGGEQFTQSALIDDAVLKGIEDCAALAPLHNPAHIIGIKAAQKAFPELKNVAVFDTAFHQTMPEEAYLY ALPYNLYKEHGIRRYGMHGTSHLFIAREAAERLGKPANELNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC GDIDPAIIFHLHDTLGYSVEKINTMLTKESGLLGLTEVTSDCRFVEDNYGQKEEATRAMDVFCHRLAKYVAGYTASLDGR LDAITFTGGIGENSAPIREMVLNRLAIFGITVDSAANLKARFGGEGVITTADSRIPAMVIATNEELVIAEDTARLTNI
Sequences:
>Translated_398_residues MSKLVLVLNCGSSSLKFAVVDAQSGEQHLSGLAECLHLPEARIKWKLDGKHEAQLGEGAAHDEALSFIVETILASKPELA AQLKAIGHRVVHGGEQFTQSALIDDAVLKGIEDCAALAPLHNPAHIIGIKAAQKAFPELKNVAVFDTAFHQTMPEEAYLY ALPYNLYKEHGIRRYGMHGTSHLFIAREAAERLGKPANELNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC GDIDPAIIFHLHDTLGYSVEKINTMLTKESGLLGLTEVTSDCRFVEDNYGQKEEATRAMDVFCHRLAKYVAGYTASLDGR LDAITFTGGIGENSAPIREMVLNRLAIFGITVDSAANLKARFGGEGVITTADSRIPAMVIATNEELVIAEDTARLTNI >Mature_397_residues SKLVLVLNCGSSSLKFAVVDAQSGEQHLSGLAECLHLPEARIKWKLDGKHEAQLGEGAAHDEALSFIVETILASKPELAA QLKAIGHRVVHGGEQFTQSALIDDAVLKGIEDCAALAPLHNPAHIIGIKAAQKAFPELKNVAVFDTAFHQTMPEEAYLYA LPYNLYKEHGIRRYGMHGTSHLFIAREAAERLGKPANELNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRCG DIDPAIIFHLHDTLGYSVEKINTMLTKESGLLGLTEVTSDCRFVEDNYGQKEEATRAMDVFCHRLAKYVAGYTASLDGRL DAITFTGGIGENSAPIREMVLNRLAIFGITVDSAANLKARFGGEGVITTADSRIPAMVIATNEELVIAEDTARLTNI
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI1788633, Length=398, Percent_Identity=73.1155778894472, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI145693184, Length=400, Percent_Identity=45, Blast_Score=338, Evalue=4e-94,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ACKA1_VIBCH (Q9KT07)
Other databases:
- EMBL: AE003852 - PIR: A82243 - RefSeq: NP_230743.1 - ProteinModelPortal: Q9KT07 - SMR: Q9KT07 - GeneID: 2614368 - GenomeReviews: AE003852_GR - KEGG: vch:VC1098 - TIGR: VC_1098 - HOGENOM: HBG285863 - OMA: PHLKDKN - ProtClustDB: PRK00180 - BRENDA: 2.7.2.1 - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF11 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 42843; Mature: 42712
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVLVLNCGSSSLKFAVVDAQSGEQHLSGLAECLHLPEARIKWKLDGKHEAQLGEGAA CCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC HDEALSFIVETILASKPELAAQLKAIGHRVVHGGEQFTQSALIDDAVLKGIEDCAALAPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIKAAQKAFPELKNVAVFDTAFHQTMPEEAYLYALPYNLYKEHGIRRYGMHGT CCCCEEEEEHHHHHHHHHHHCEEEEEHHHHHCCCCCEEEEEECHHHHHHCCCEEECCCCC SHLFIAREAAERLGKPANELNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC CEEEEEHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIIFHLHDTLGYSVEKINTMLTKESGLLGLTEVTSDCRFVEDNYGQKEEATRAMD CCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCCEEHHHHCCCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTASLDGRLDAITFTGGIGENSAPIREMVLNRLAIFGITVDSAANLKA HHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEE RFGGEGVITTADSRIPAMVIATNEELVIAEDTARLTNI EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC >Mature Secondary Structure SKLVLVLNCGSSSLKFAVVDAQSGEQHLSGLAECLHLPEARIKWKLDGKHEAQLGEGAA CCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC HDEALSFIVETILASKPELAAQLKAIGHRVVHGGEQFTQSALIDDAVLKGIEDCAALAPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIKAAQKAFPELKNVAVFDTAFHQTMPEEAYLYALPYNLYKEHGIRRYGMHGT CCCCEEEEEHHHHHHHHHHHCEEEEEHHHHHCCCCCEEEEEECHHHHHHCCCEEECCCCC SHLFIAREAAERLGKPANELNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC CEEEEEHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIIFHLHDTLGYSVEKINTMLTKESGLLGLTEVTSDCRFVEDNYGQKEEATRAMD CCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCCEEHHHHCCCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTASLDGRLDAITFTGGIGENSAPIREMVLNRLAIFGITVDSAANLKA HHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEE RFGGEGVITTADSRIPAMVIATNEELVIAEDTARLTNI EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301