| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081224
Identifier: 227081224
GI number: 227081224
Start: 1078901
End: 1079032
Strand: Direct
Name: 227081224
Synonym: VCM66_1006
Alternate gene names: NA
Gene position: 1078901-1079032 (Clockwise)
Preceding gene: 227081223
Following gene: 227081225
Centisome position: 37.3
GC content: 43.94
Gene sequence:
>132_bases ATGGCAAACCAAGAGTTCAAAGAACCCTTCAATATCTATTACTTTCTAGGCGTGGTTGCAGTCCTGCTAATCCCGACTCT GCCTGCAACACTGACTTGGATTCGTGTATTTAACGGGTACGCTGGATTTTAA
Upstream 100 bases:
>100_bases GTGTTTGTTGCAGCTCGCTTTCGTTATAGTTCCGACCACAAAATTAATGAGGCTACCTTAGAGTTGCCCAGTTTAAAGTC ACCCAAAAGAGAAAATTACA
Downstream 100 bases:
>100_bases TGCGTTCATCCTTACCACGTTTTTTGTTCAGTGTTATTGGAATAACCAGTCTATGCCTAGGGATACTGGGCATATTTCTT CCTCTTCTGCCCACCACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF
Sequences:
>Translated_43_residues MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF >Mature_42_residues ANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4926; Mature: 4795
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA