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The map label for this gene is ybaN [H]

Identifier: 227081225

GI number: 227081225

Start: 1079032

End: 1079430

Strand: Direct

Name: ybaN [H]

Synonym: VCM66_1007

Alternate gene names: 227081225

Gene position: 1079032-1079430 (Clockwise)

Preceding gene: 227081224

Following gene: 227081226

Centisome position: 37.3

GC content: 45.61

Gene sequence:

>399_bases
ATGCGTTCATCCTTACCACGTTTTTTGTTCAGTGTTATTGGAATAACCAGTCTATGCCTAGGGATACTGGGCATATTTCT
TCCTCTTCTGCCCACCACACCCTTTATCTTACTGTCTAGTGCTTGTTTTTTACGCAGCAGTCCTCGGTTCTATCGCTGGT
TGAATCAACATGCGACATTTGGCCCTATGATTCAAAACTGGCAACAACATGGCGCGGTCAGTAAAGCGGTGAAAAAGCGC
GCCACACTCTTTATCGTGCTGAGTTTTGCCTTTTCGATCTGGATGGTTCCTTGGCTGTGGCTCAAGGTTGCGCTGTTTAT
CTGGCTTGTGCTTTTGATCACTTGGTTTATCCGTTTACCAACCCATGAGCTGGTTGCTAACCAACAAGAAAATCACTAG

Upstream 100 bases:

>100_bases
ATATCTATTACTTTCTAGGCGTGGTTGCAGTCCTGCTAATCCCGACTCTGCCTGCAACACTGACTTGGATTCGTGTATTT
AACGGGTACGCTGGATTTTA

Downstream 100 bases:

>100_bases
CATTAGCGGGAAGTGTGCCCACTCTTCGAGTGGGCTTTGTTTTTTCAGTGCTGTCGTTCCCTTGTGGCAGACGGCTCCGA
AATTGTTCTGTCATCACCTA

Product: putative Inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKAVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH

Sequences:

>Translated_132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKAVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH
>Mature_132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKAVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=126, Percent_Identity=43.6507936507937, Blast_Score=106, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 15313; Mature: 15313

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GPMIQNWQQHGAVSKAVKKRATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THELVANQQENH
HHHHHHCCCCCC
>Mature Secondary Structure
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GPMIQNWQQHGAVSKAVKKRATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THELVANQQENH
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]