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The map label for this gene is 227081179

Identifier: 227081179

GI number: 227081179

Start: 1033430

End: 1034755

Strand: Reverse

Name: 227081179

Synonym: VCM66_0961

Alternate gene names: NA

Gene position: 1034755-1033430 (Counterclockwise)

Preceding gene: 227081180

Following gene: 227081168

Centisome position: 35.77

GC content: 51.13

Gene sequence:

>1326_bases
ATGAATCCAGTAGTCATTTCCGTTTGTGTCATGCTGCTGCTAGCCCTGATGCGGGTGAACGTCGTGGTTGCTTTGACGTT
CAGTGCCGTGGTCGGTGGTTTAGTCGCTGGTATGAGTTTGAATGAAACCGTTGCCGCATTTGAAAGCGGTTTGGGTGGTG
GCGCCACGATCGCCCTGAGTTACGCCATGCTTGGCACCTTTGCGGTGGCCATTTCGAAATCGGGGATCACCGATTTACTG
GCGCAAAGCGTGATTCGTCGCATTCACGGCCAAGAAAGCCACGCAGCATCAACCGGGTTAAAATACCTCGTACTCATCTC
TTTGCTGCTGATGGCGATGGCCTCACAAAACGTCATCCCCGTCCACATTGCGTTTATCCCCATTTTGATCCCGCCGCTCC
TGAGTGTCTTTGCTAAGCTGAAACTCGACCGTCGCTTAGTCGCCTGCGTCCTCACTTTTGGCTTGATCACACCTTACATG
GTGCTTCCTGTCGGTTTTGGGGGCATTTTCCTCAACAACATTTTGCTAAAAAACCTGCATGAAAATGGTTTGGAAAGCAT
CACCGCAAGCCAAGTTCCCACGGCGATGATTTTGCCCGCAGCTGGGATGATTTTTGGTCTGTTGCTGGCGGTACTTTTTA
GCTATCGCAAACCTCGTGAGTATCAAGAAACAGAATTGACCGTTGTGCAACAAGAAAGCTCGTCGATCAATAAACAGCAT
ATTGCGATTGCGGGTGTCGGCATTGTGGCTGCATTAGCGGTGCAATTGTTGACGGGGTCTATGATCATTGGCGCACTAGC
AGGCTTTATGGTATTCACTTTTGGGGGCGTGATTGCGTGGAAAGAGACGCATGATGTGTTCACAAGAGGCGTGCATATGA
TGGCGATGATTGGCTTTATCATGATTTCTGCGGCTGGTTTTGCCGCGGTGATGAAAGCCACTGGCGGCGTTGAAACGCTG
GTCACATCCCTTTCCACCAGCATTGGTGACAATAAAGCTCTAGCAGCTCTGCTGATGTTAGTCGTAGGTTTGTTGGTGAC
TATGGGCATCGGCTCGTCATTCTCGACCATTCCGATCATCGCGACCATCTATGTTCCGCTGTGTCTTTCGTTTGGTTTTT
CCCCAATGGCCACCGTTGCTCTGGTCGGTACCGCCGCTGCGTTAGGAGATGCAGGATCTCCTGCGTCCGATTCAACCTTA
GGCCCAACATCCGGCCTCAATGCGGATGGTCAGCACGAGCATATTTGGGAAACCGTTGTGCCAACCTTTATTCACTACAA
CCTGCCACTCATTGTCTTCGGTTGGATTGCCGCCATGGTGCTGTAA

Upstream 100 bases:

>100_bases
AGCTCGTTCTACCCATGGACCGCTTTAACCAATCAGGCCCATCCCTACCCTTCTTGCTTCTTCAAGTGGGCTGGGGATAC
ACAACATCCCGAGAAAAAAT

Downstream 100 bases:

>100_bases
TCTCAGCTAACCGAGAGTCAAACCATCACCTCATCCCCTCACCCAAGCGTAGCGGTCGTGAGGGGGATAACGAAAAAGGC
TTCCCGCAGGAAGCCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALSYAMLGTFAVAISKSGITDLL
AQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIPVHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYM
VLPVGFGGIFLNNILLKNLHENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH
IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFIMISAAGFAAVMKATGGVETL
VTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPIIATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHIWETVVPTFIHYNLPLIVFGWIAAMVL

Sequences:

>Translated_441_residues
MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALSYAMLGTFAVAISKSGITDLL
AQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIPVHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYM
VLPVGFGGIFLNNILLKNLHENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH
IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFIMISAAGFAAVMKATGGVETL
VTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPIIATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHIWETVVPTFIHYNLPLIVFGWIAAMVL
>Mature_441_residues
MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALSYAMLGTFAVAISKSGITDLL
AQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIPVHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYM
VLPVGFGGIFLNNILLKNLHENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH
IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFIMISAAGFAAVMKATGGVETL
VTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPIIATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHIWETVVPTFIHYNLPLIVFGWIAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 45998; Mature: 45998

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHH
YAMLGTFAVAISKSGITDLLAQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYMVLPVGFGGIFLNNILLKNLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECHHHCCCHHH
IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
MISAAGFAAVMKATGGVETLVTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPII
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHIWETVV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PTFIHYNLPLIVFGWIAAMVL
HHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHH
YAMLGTFAVAISKSGITDLLAQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYMVLPVGFGGIFLNNILLKNLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECHHHCCCHHH
IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
MISAAGFAAVMKATGGVETLVTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPII
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHIWETVV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PTFIHYNLPLIVFGWIAAMVL
HHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]