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The map label for this gene is ybbN [H]

Identifier: 227081151

GI number: 227081151

Start: 999599

End: 1000519

Strand: Reverse

Name: ybbN [H]

Synonym: VCM66_0933

Alternate gene names: 227081151

Gene position: 1000519-999599 (Counterclockwise)

Preceding gene: 227081152

Following gene: 227081150

Centisome position: 34.59

GC content: 45.6

Gene sequence:

>921_bases
TTGAGTTTTGAAGCCTTCATCCCCATAGTTTATTCAGCGATGTGCCATCCAAACCAAGGATTTGCTATGCAAGCAGCGAA
GATTATTGACGTTTCTCAACATAACTTTCACCAAGTGCTCCAACACTCCACCCTCTCACCAGTACTTTTTTATTTTTGGG
CTCCAATAAGCCATGAGAGTGCCGAGCTGTTACCCGCGATTGAACAACTCACCGAACGTTATCAAGGAGCCTTTGTTCTT
GCACGCTTAAATTGCCAAGAAGAACAAGGGATTGCTGCGCAGTTTGGGATCCAAGCGATTCCGACCATTGCGCTGTTTAT
TGAAGGTAAACCCGTCGATGGATTAGGCGGCCCCCAGCCAATTGAAGCGGTTGAGGAAATGCTTAAGCGTCATTTGCCAA
GCGATGAAGAGCGCCTCATGTACCAAGGATTCGAGCTTGCAGAGCAAGAGCAATTTAGTGAAGCATTATCTCTGCTCAGC
ACATTGAGTGATGAGTGGCGTAATAAAGGTGAGGTCAAACTCACTCTAGCTCGCTGTTATCTAGAAACCGGCGCAGTAGA
AGCGGCGCAAACCGAGCTGGCCAACATGCCACTTGAATACCAACAAGGTGAATACAAAACGCTGATCGCGAGACTCGAAT
TACATCAACAAGCCGCGAATAGCCCAGAAATTATCGCTCTTGAGCAAGAGTGGAATAGTGACCCGCAGAATCCCAATATT
GCTATAGAGCTTGCCAAACAATATCACCATGTCAAACGCGACGAGGAAGCCCTCTCCTTACTCTGGTCTTGGCTCAGTAA
AAATCTAAACACCTTAGATGGTGAAATGAAAAAAACCTTTATGGATATCCTAACCGCCCTAGGTCAAGGTCATCCATTAG
CGAATCAGTATCGTAAAAAACTCTATTCACTTCTTTACTAA

Upstream 100 bases:

>100_bases
CATATATCAACCTCTTGCATCACTGTTCGACGACTCAGTTCAAACAAGAGAACCGCTCCCATCACGCGATCACTTTATCT
AGTAAGGAACTTACCTAGGC

Downstream 100 bases:

>100_bases
CCCAAGTCCAGCCGATTCACGACGTGAAGCATACAGCCAACACGGCGGCTGCTTGAAATAGGAAAAGACATATGGCGCTC
TAATATGAGCGCCATATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSFEAFIPIVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVL
ARLNCQEEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHLPSDEERLMYQGFELAEQEQFSEALSLLS
TLSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQGEYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNI
AIELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKKLYSLLY

Sequences:

>Translated_306_residues
MSFEAFIPIVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVL
ARLNCQEEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHLPSDEERLMYQGFELAEQEQFSEALSLLS
TLSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQGEYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNI
AIELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKKLYSLLY
>Mature_305_residues
SFEAFIPIVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVLA
RLNCQEEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHLPSDEERLMYQGFELAEQEQFSEALSLLST
LSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQGEYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNIA
IELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKKLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=287, Percent_Identity=43.5540069686411, Blast_Score=244, Evalue=5e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 34688; Mature: 34557

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEAFIPIVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHES
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCH
AELLPAIEQLTERYQGAFVLARLNCQEEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQP
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHCHHHHCEEEEEEECCCCCCCCCCCH
IEAVEEMLKRHLPSDEERLMYQGFELAEQEQFSEALSLLSTLSDEWRNKGEVKLTLARCY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
LETGAVEAAQTELANMPLEYQQGEYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNI
HHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCH
AIELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKK
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LYSLLY
HHHHCC
>Mature Secondary Structure 
SFEAFIPIVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHES
CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCH
AELLPAIEQLTERYQGAFVLARLNCQEEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQP
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHCHHHHCEEEEEEECCCCCCCCCCCH
IEAVEEMLKRHLPSDEERLMYQGFELAEQEQFSEALSLLSTLSDEWRNKGEVKLTLARCY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
LETGAVEAAQTELANMPLEYQQGEYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNI
HHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCH
AIELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKK
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LYSLLY
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]