| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081152
Identifier: 227081152
GI number: 227081152
Start: 1000691
End: 1000807
Strand: Reverse
Name: 227081152
Synonym: VCM66_0934
Alternate gene names: NA
Gene position: 1000807-1000691 (Counterclockwise)
Preceding gene: 227081153
Following gene: 227081151
Centisome position: 34.6
GC content: 36.75
Gene sequence:
>117_bases TTGAGTAAAAACATCAATATCTATCAAGCGTTGCATGTGGTTCGACAAAAAATGACATTAAACCAATGGAATTGGATCGG TGTCGGTGTTGCGCTGACCTTATTTATACTGCTTTAA
Upstream 100 bases:
>100_bases ACAAATTATTATTTAAAGCCGCATAAATTATTTAATTGTCATTATTTGGTAACAATTGCGCGGCAAACTTCATAATGCTC ACTGGATTAACTCCTAGACA
Downstream 100 bases:
>100_bases ACACCTTTGCTTGCTCGCTCGTAAGAGCCACAAAATCACCACCTTCGGGTGGTGATTTTGTTTTAATCCTGCATATATCA ACCTCTTGCATCACTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 37
Protein sequence:
>38_residues MSKNINIYQALHVVRQKMTLNQWNWIGVGVALTLFILL
Sequences:
>Translated_38_residues MSKNINIYQALHVVRQKMTLNQWNWIGVGVALTLFILL >Mature_37_residues SKNINIYQALHVVRQKMTLNQWNWIGVGVALTLFILL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4427; Mature: 4296
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNINIYQALHVVRQKMTLNQWNWIGVGVALTLFILL CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure SKNINIYQALHVVRQKMTLNQWNWIGVGVALTLFILL CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA