| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ptsH
Identifier: 227081140
GI number: 227081140
Start: 989049
End: 989306
Strand: Reverse
Name: ptsH
Synonym: VCM66_0922
Alternate gene names: 227081140
Gene position: 989306-989049 (Counterclockwise)
Preceding gene: 227081141
Following gene: 227081139
Centisome position: 34.2
GC content: 46.9
Gene sequence:
>258_bases ATGTACGAGAAGCAAGTAGAAATCACTGCAGAAAACGGCCTTCACACTCGTCCTGCTGCACAGTTTGTTAAAGAAGCAAA AGCCTTCGATGCAGACATCACTGTGACTTCTAACGGTAAAAGTGCAAGCGCGAAAAGTCTGTTCAAGCTGCAAACGCTAG GTCTGGTAAAAGGTACTGTCGTGACTATCTCTGCCGAAGGCCCTCAGGCAAAAGAAGCTGTTGAGCACCTAGTTGCTCTG ATGGACCAACTTCACTAA
Upstream 100 bases:
>100_bases CACGAAAAGCCTGTGACAGTGCTAGCACAAAGCAGTTTATGCGGTTAAGCTAAATCTGGTTAACAAACTTACAAAAAATA AACTCATTGGGGTATAAAAC
Downstream 100 bases:
>100_bases TCCGGTCTTCCTTTCAAAGCCATTTTGTTCACGCAAAATGGCTTTGTTGGAAATAACCCGAGAAATACGCTAAACGTTAC GGTTAGCGATTGTCCACTCT
Product: phosphocarrier protein HPr
Products: D-sorbitol 6-phosphate [Cytoplasm]; pyruvate; alpha,alpha-trehalose 6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; D-glucosamine-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; galactitol-1-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm]; fructose-1-phosphate [Cytoplasm]; glucose-6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm]; salicin-6-phosphate [Cytoplasm]; arbutin-6-phosphate [Cytoplasm] [C]
Alternate protein names: Histidine-containing protein
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTISAEGPQAKEAVEHLVAL MDQLH
Sequences:
>Translated_85_residues MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTISAEGPQAKEAVEHLVAL MDQLH >Mature_85_residues MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTISAEGPQAKEAVEHLVAL MDQLH
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain
Homologues:
Organism=Escherichia coli, GI1788755, Length=84, Percent_Identity=76.1904761904762, Blast_Score=129, Evalue=3e-32,
Paralogues:
None
Copy number: 4180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 2100 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 3235 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): PTHP_VIBCH (Q9KTD6)
Other databases:
- EMBL: AE003852 - PIR: A82258 - RefSeq: NP_230613.1 - ProteinModelPortal: Q9KTD6 - SMR: Q9KTD6 - GeneID: 2614219 - GenomeReviews: AE003852_GR - KEGG: vch:VC0966 - TIGR: VC_0966 - HOGENOM: HBG653254 - OMA: DEQQAVE - ProtClustDB: CLSK874166 - GO: GO:0005737 - InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 - Gene3D: G3DSA:3.30.1340.10 - PRINTS: PR00107 - TIGRFAMs: TIGR01003
Pfam domain/function: PF00381 PTS-HPr; SSF55594 HPr_protein
EC number: NA
Molecular weight: Translated: 9110; Mature: 9110
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS51350 PTS_HPR_DOM; PS00369 PTS_HPR_HIS; PS00589 PTS_HPR_SER
Important sites: ACT_SITE 15-15
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTV CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEE VTISAEGPQAKEAVEHLVALMDQLH EEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MYEKQVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTV CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEE VTISAEGPQAKEAVEHLVALMDQLH EEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sorbitol [Periplasm]; phosphoenolpyruvate; trehalose [Periplasm]; mannitol [Periplasm]; glucosamine [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; galactitol [Periplasm]; fructose [Periplasm]; beta-D-glucose [Periplasm]; diacetylchitobiose [Periplasm]; cellobiose [Periplasm]; salicin [Periplasm]; arbutin [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + sorbitol [Periplasm] = D-sorbitol 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + trehalose [Periplasm] = alpha,alpha-trehalose 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + mannitol [Periplasm] = mannitol-1-phosp
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301