| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227081141
Identifier: 227081141
GI number: 227081141
Start: 989391
End: 989600
Strand: Reverse
Name: 227081141
Synonym: VCM66_0923
Alternate gene names: NA
Gene position: 989600-989391 (Counterclockwise)
Preceding gene: 227081142
Following gene: 227081140
Centisome position: 34.21
GC content: 36.67
Gene sequence:
>210_bases GTGGTTAAATCAAATTTTCGTTTAAAAAAGCCCCAGTCAGGGGCTTTTTTGTTGATCCCTGCCTCACCTTTGGTAATATC GGCATGTTTTATTTTTAGCTTCAAAATAAAGAAGCAGACGGTTTACGCTCAATTGCTCAAATTGCAAAAAATAGCAAAGG CGATTGATAATATTTTGACCAGTCTTAGTTCTAACACGAAAAGCCTGTGA
Upstream 100 bases:
>100_bases AAAAACTATAGTTACCGTGTTACCAAGTTCAGGTGAACGTTACTTGAGCACAGCTCTATTCGCAGGCATTTTCACTGATA AAGAAAACCAGCAGTAATAC
Downstream 100 bases:
>100_bases CAGTGCTAGCACAAAGCAGTTTATGCGGTTAAGCTAAATCTGGTTAACAAACTTACAAAAAATAAACTCATTGGGGTATA AAACATGTACGAGAAGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MVKSNFRLKKPQSGAFLLIPASPLVISACFIFSFKIKKQTVYAQLLKLQKIAKAIDNILTSLSSNTKSL
Sequences:
>Translated_69_residues MVKSNFRLKKPQSGAFLLIPASPLVISACFIFSFKIKKQTVYAQLLKLQKIAKAIDNILTSLSSNTKSL >Mature_69_residues MVKSNFRLKKPQSGAFLLIPASPLVISACFIFSFKIKKQTVYAQLLKLQKIAKAIDNILTSLSSNTKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7642; Mature: 7642
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSNFRLKKPQSGAFLLIPASPLVISACFIFSFKIKKQTVYAQLLKLQKIAKAIDNILT CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSSNTKSL HHCCCCCCC >Mature Secondary Structure MVKSNFRLKKPQSGAFLLIPASPLVISACFIFSFKIKKQTVYAQLLKLQKIAKAIDNILT CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSSNTKSL HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA