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The map label for this gene is 227081079

Identifier: 227081079

GI number: 227081079

Start: 921699

End: 922475

Strand: Direct

Name: 227081079

Synonym: VCM66_0861

Alternate gene names: NA

Gene position: 921699-922475 (Clockwise)

Preceding gene: 227081078

Following gene: 227081083

Centisome position: 31.86

GC content: 50.71

Gene sequence:

>777_bases
ATGTACGTGGTTGAGTTGGAGTTTGAGTGTTTTGATAACACCACCATCAGCGCCGTGGATAAAGCCATCAACGGCTTGAT
GGATGCGCTGCGCTATAACGGACAAGTATTGGGGCGTGAGTTCCCGATTGTGCTGGGTGATGGGGTATTTTACGTGCGCG
CCGTCTGCCCTGAAAAAGAGAGCTTGCACCCGAAATTTCATTCCGAATACGTTGAAGCTTGTGTGAGCCGTTTAAGTGAG
GCCAGTTTGCTCGCGCCGAAAGTTCGCATTCTGGGGTTAGACATCAACTCAGAACAAGCCGCGGAAGAGGAAATGCCGAG
CTGGCAGGTGCTGTACACCACCTATGTGCATACGTGTTCACCATTGCGCAGCGGTGAAAGTCTGTTGCCTATTCCTCTGT
ATCGTAATCCGCCGACCTTTAATGGTGACCACAAAGCGGTGATCAAATGGCAAACTGAATGGCAAGCGTGTGATGAATTG
CAAATGGCCGGAGCGTGCAAAGCTGAGCATGCCGCACTGCATGAGATTTGTGATGTGGACAGTGATTTGTTCCGCCGAGG
TTGGGATTTACGTGGTCGGATTGAATTTTTGACTCAAGTGCCAACCTATTACTATCAGTATCGGGTCGGTGGCAGTAGCC
TTGCGCAAGAAAAAGCGCGCCCTTGCCCTAAGTGCGGCGGAGAGTGGTTATTGGATGAGCCACTGCACGACATCTTCCAT
TTCCGTTGTGAGCCGTGCCGAATTGTCTCCAATATCTCTTGGGATCACTTGAAATAG

Upstream 100 bases:

>100_bases
GGTAATGTGATCCTCGAGAAATTAGGGACAGCGCAGCGTGAAGTATTGACTGCCGATCTTGAGACGTTTTTAGAACAGCT
TGAACCAAAGGTGAATTGAG

Downstream 100 bases:

>100_bases
AGTGCTGGATGCACCTTCATTCCCCCGCATTCATCTTTTCTCTATTCGTATTCAAAGCACTCAGTAATAAAAAAGGTTGG
CGTAGTGCCAACCTTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKESLHPKFHSEYVEACVSRLSE
ASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCSPLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDEL
QMAGACKAEHAALHEICDVDSDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGEWLLDEPLHDIFH
FRCEPCRIVSNISWDHLK

Sequences:

>Translated_258_residues
MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKESLHPKFHSEYVEACVSRLSE
ASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCSPLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDEL
QMAGACKAEHAALHEICDVDSDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGEWLLDEPLHDIFH
FRCEPCRIVSNISWDHLK
>Mature_258_residues
MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKESLHPKFHSEYVEACVSRLSE
ASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCSPLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDEL
QMAGACKAEHAALHEICDVDSDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGEWLLDEPLHDIFH
FRCEPCRIVSNISWDHLK

Specific function: Unknown

COG id: COG5595

COG function: function code R; Zn-ribbon-containing, possibly nucleic-acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016908 [H]

Pfam domain/function: PF10071 DUF2310 [H]

EC number: NA

Molecular weight: Translated: 29433; Mature: 29433

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKE
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEEEECCCCC
SLHPKFHSEYVEACVSRLSEASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCS
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHCC
PLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDELQMAGACKAEHAALHEICDVD
CCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
SDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGEWLLDEPLHDIFH
HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FRCEPCRIVSNISWDHLK
CCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MYVVELEFECFDNTTISAVDKAINGLMDALRYNGQVLGREFPIVLGDGVFYVRAVCPEKE
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEEEECCCCC
SLHPKFHSEYVEACVSRLSEASLLAPKVRILGLDINSEQAAEEEMPSWQVLYTTYVHTCS
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHCC
PLRSGESLLPIPLYRNPPTFNGDHKAVIKWQTEWQACDELQMAGACKAEHAALHEICDVD
CCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
SDLFRRGWDLRGRIEFLTQVPTYYYQYRVGGSSLAQEKARPCPKCGGEWLLDEPLHDIFH
HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FRCEPCRIVSNISWDHLK
CCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]