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The map label for this gene is 227081076

Identifier: 227081076

GI number: 227081076

Start: 917931

End: 920192

Strand: Reverse

Name: 227081076

Synonym: VCM66_0858

Alternate gene names: NA

Gene position: 920192-917931 (Counterclockwise)

Preceding gene: 227081077

Following gene: 227081075

Centisome position: 31.81

GC content: 42.93

Gene sequence:

>2262_bases
ATGAGATTTCTGCGCTGGATAACCATAGCGACCTTACTTCTGGCTTCAAGTTGGGCTCAGGCCACGATTTACTCTTCACC
TATGCTCAATGAAGCTAGCGGCTTGGTCGAGGTCTCACCCTTACAAGCAAAAAAAATGGCGCAGCAGTACCTTAATGAGC
GCCATTTAGCCGAGAAACAGGAAAAACACCCCGCCACAATTGCTCGAGATGAAGCCGACAGCCGAACACGCACACCCGGC
AGTACGGTCGATGCCTTGATGATTTTGGCGCTCGCCTTGGATAATCTTGGTGAACATGAACAAGCGCAACAGATTTTGCG
CGATGCCAATGCACTGACTGAACAATACCAACTCCCCTATCTACACCTCGATGTGCAAATCCTTAGCACTCGTCTTATTT
GGCAGAAAGAGGGTGATGCACAGGCCGCGCGCGAAAGAATACAGAAGATCAATGAGCAGTATCAGGTGATCGAAAATGCC
GATCAAATCGCCAAAGGCATTGATTACAAACTTACGTTACTCAGTGCCGAAATCGCCTCAAAAGCCAATGAGCTTGAATT
GGCCGATAAGCTGTTTGCCAAGGCCAAACCCTATCTTGACACCTTACAAAACGAAAAACCGGCCATTGAGTATCACCTAA
CCTTAGGTGAGCACAATCTTAGCCATGGACGTTATAACCTGGCGCTTTCCGAATTGCTGATCGCCTACTGGAGTGCTATT
GAGAACAACGCCGGCGTGCTGTTAGCGCAAGCAAACACACTGCTAGGCAAACTGTTTTTCAATCGCCAAGTGTTAGATAA
AGCACTCGATCACTTCTCACAAGCGGCAGACTTTTATGGCCGCTACGAACAATCGCCATTTTTATCTGCTGTTCTCAAAC
AAATGGGTGATGTCTACTACCAGCAAGGCAAATATAACTTAGCGTTAGTGCATTATTTCAATGTGATTGACCATCAAAAT
AATCAATCGTCACTCAGTGATGAAATTGAAATTCGCATCAATCTCTCCGCTACCTATTTACAACTCTACAACTACCCCGT
TGCTGAGCAGTATTTAACCAGCGCTGAAGAGCTATTAGGAATGGCTGATATTCCTCGTTTAAATGGGCACGCCGCCTTAC
TGCATTCAGGGTTGGCTTATTATCAAGAAATAAATCAGGATATCGTTCGTTATGCAGAAATGGCACTGCATATTGGTCAA
TCGATTCAAGATGACGAACTTCAAGAGCAAGCTTACCGTTTACTTTCTCTCGGTTATGAAAGAACCGGCTCAGCCGCCAA
AGCGCTAGACAATTTTAAAAAGAGTCAGGTTCTCGCCCAAAAACGACAAAATAAGCTTAACCAAATCAGTGAAGATGCAT
TTCGTCAGCAACGGGAGTTTATTGAACAGACCTTGCATTTAGTTGGACAAGAAAAACAGCTGCAAGAGACCAACAATCAA
TTCAGCCAATTACGTAAAGTGGCTTTGTTTTTACTGAGCATTAGCTTAGTACTTTTTCTGATTACTTTGCGACGCGGTTA
TCTTATTCAAGGCTTTCAAGATCAAATCTCTGAGTTACATGACACTTTATTTACTCACTCAAGATCGCGCCTAAGCAATC
TACGCATGCTGAATGCGAAGTTACCCAGTTCATTAGAAAACAGTAACCGTAACTATGAACAGTGGCAGCTAGGGGAGCTC
ATTCGTCAACCGCTCAACGATAGACTGCGTTTTGTGCTGATCGACATTCCTTTCATGCGCAACATGTATCTGCAAAATGG
TTATACCGCCGGTTTAGAATTAGAGCGCGCTTTTGGTAAATTTCTTAAAACTAAAATAAAAGAACCCGATCGGTTGTACC
ATTTTTCAGATGCAAGCTTGTTGTATATCGAAAAAAATGGCAGCGAGCGAAGTGAACCAGAAATATTATTCAACCAGATT
CAATCTTGGCTGAATGATTTTGCACCAGAAAGAAAAATAAACCGAATAGTTCGAATTGGTATTGCCGATTACCCATTTTT
ACCGCGGGCTTATACCGCCATCAATGATAAAGAATTGTTGGATATTTTGTTGATGGCAACCAATATCGCCAGAGAGTTAA
GCTTGAGTGAAGGCCAAAGTCATTGGGTCTATTTTAAAGCGATTGATAATGCCCCAGCCGCCAGCTTTGCTTCGGAAAAT
ATTCGACTTTCTTGTAAACAAGCAATAAATCAAGGGCTGATCAAAGTTCACTCTTCTTATAAGAATGAGGACAACATCAA
AAAACTCTTAAAAGATGGATAA

Upstream 100 bases:

>100_bases
CTCGACGCGGTGGCTTAGACATTAACCCATTCCGCTCCAGCCACCAGTCAGCACCGAACCATAATCAACGCATGGCGCGA
CAATAAGGATAAGACTTAGG

Downstream 100 bases:

>100_bases
ATGCTGCCCAGTCGGCATAAACACTGAGTGACGCCAGCAAAATATTTGTTATTATCGACAAATCAATAAATAGGATCAGG
ATTGATCCTCAACTATCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MRFLRWITIATLLLASSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG

Sequences:

>Translated_753_residues
MRFLRWITIATLLLASSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
>Mature_753_residues
MRFLRWITIATLLLASSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86282; Mature: 86282

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRWITIATLLLASSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQ
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
EKHPATIARDEADSRTRTPGSTVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPY
HCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
LHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENADQIAKGIDYKLTLLSAEIAS
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
KANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
CCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYY
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QQGKYNLALVHYFNVIDHQNNQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLG
HCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHC
MADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQSIQDDELQEQAYRLLSLGYE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSSLENSNRNYEQWQLGELIRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGK
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
FLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQIQSWLNDFAPERKINRIVRIG
HHHHHCCCCHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCC
IADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCC
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MRFLRWITIATLLLASSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQ
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
EKHPATIARDEADSRTRTPGSTVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPY
HCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
LHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENADQIAKGIDYKLTLLSAEIAS
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
KANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
CCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYY
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QQGKYNLALVHYFNVIDHQNNQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLG
HCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHC
MADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQSIQDDELQEQAYRLLSLGYE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSSLENSNRNYEQWQLGELIRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGK
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
FLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQIQSWLNDFAPERKINRIVRIG
HHHHHCCCCHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCC
IADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCC
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA