| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is citX [H]
Identifier: 227080979
GI number: 227080979
Start: 814444
End: 814980
Strand: Direct
Name: citX [H]
Synonym: VCM66_0758
Alternate gene names: 227080979
Gene position: 814444-814980 (Clockwise)
Preceding gene: 227080978
Following gene: 227080980
Centisome position: 28.16
GC content: 53.82
Gene sequence:
>537_bases ATGAGTCACCATCCGGATCTTTCAGTCAGTCTGGACCAGCTCCTTCTGCGTAAAGAAGTGCGGGTTCGGCAACAAGGTGA GTGGCTAAAGCGCCATTCACTGCCTCTGGTTTCTTTCACGGTTAACATGCCGGGCGCGGTTAAGCTCAACGCTGCCAGCC AAACCGTGATGGATGCAGGTATGCGTGCCATTCAAGAGCTCTGTCAGAAAACGGGCTGGCGGCAAGTGGCTTGTCAGTTG TTGGTGGAAAAAACCGGACCGGAAGCCTTTGTGGTAATTCAGGCTCCATCGGCCAGCATGTTGAAAAAAGCCATGATGAA GATTGAACGCGAGCACCCGCTGGGGCGACTGATGGATCTGGATGTAATTGATGTCGATGGACATATTATTTCGCGCCAAG GTGCGCAGTTGCCAAGACGGCGCTGCCTGCTGTGTGAACGCGATGCGGTGATCTGTGCTCGCTCACGGCGGCACAGTGTC GAAGCTTTGCTGGCAAAAATTGAGGAGATGACGCATGACTATTCCTGCTGCGCTTGA
Upstream 100 bases:
>100_bases CGGGCAAACCCCAGCCGTTGCAATTTGAAGACAAAACCGTTGCCTTTGTTCACTACCGTGACGGTTCGATCATTGATGTT ATCAAACAGGTAAAAAGCCT
Downstream 100 bases:
>100_bases TCTGCTGCTTGAACTGCCTAGCCAAGCGTCTTCCTCTTCAGGTTCAAGGACCTTCAGCTTGCCCCGCTTAGTGGGGCATC TGGCCTACCATGCCATGATG
Product: citX protein
Products: NA
Alternate protein names: Apo-ACP nucleodityltransferase; Holo-ACP synthase; Holo-citrate lyase synthase [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAVKLNAASQTVMDAGMRAIQELCQKTGWRQVACQL LVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSV EALLAKIEEMTHDYSCCA
Sequences:
>Translated_178_residues MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAVKLNAASQTVMDAGMRAIQELCQKTGWRQVACQL LVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSV EALLAKIEEMTHDYSCCA >Mature_177_residues SHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAVKLNAASQTVMDAGMRAIQELCQKTGWRQVACQLL VEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVE ALLAKIEEMTHDYSCCA
Specific function: Transfers 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A on a serine residue to the apo-acyl carrier protein (gamma chain) of the citrate lyase to yield holo-acyl carrier protein [H]
COG id: COG3697
COG function: function code HI; Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitX family [H]
Homologues:
Organism=Escherichia coli, GI1786831, Length=176, Percent_Identity=42.6136363636364, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005551 [H]
Pfam domain/function: PF03802 CitX [H]
EC number: =2.7.7.61 [H]
Molecular weight: Translated: 20050; Mature: 19919
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAVKLNAASQTVMDAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHH MRAIQELCQKTGWRQVACQLLVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDL HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHCCC DVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVEALLAKIEEMTHDYSCCA EEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAVKLNAASQTVMDAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHH MRAIQELCQKTGWRQVACQLLVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDL HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHCCC DVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVEALLAKIEEMTHDYSCCA EEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA