| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080594
Identifier: 227080594
GI number: 227080594
Start: 381120
End: 381290
Strand: Direct
Name: 227080594
Synonym: VCM66_0367
Alternate gene names: NA
Gene position: 381120-381290 (Clockwise)
Preceding gene: 227080593
Following gene: 227080595
Centisome position: 13.18
GC content: 35.67
Gene sequence:
>171_bases TTGTTTTTGCCGATGGTTGGTTTGTGGGGGCTCAATTTAGCTTCTGATGAATTTCTCATTATTGAGTTTTTTGCTAACCA ATACGTTTTAAATGAGCCACAAGTTGGCTCATTTTTACTATTTGGACCATGCTTAGTTTTATCAATAAGCCAAGGATGGA AAGCAAAATGA
Upstream 100 bases:
>100_bases CCGATCCGAGCGGGAGACCTCGCATTCAAAGCGGGCTATCGAGTGGTAGATCTTGAGTTCACTGAACTGGCTAAGCAGTC CACCGATGTAAAGCAATCTT
Downstream 100 bases:
>100_bases CGATTCCGGAGTTAAGAGAGCTATATCAAACCCAGCAGCTCGTTGAGGCCATTATTGAGCCCTCCTTTCAAGAAGGGGAA TGGATTGTCGAATTTCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MFLPMVGLWGLNLASDEFLIIEFFANQYVLNEPQVGSFLLFGPCLVLSISQGWKAK
Sequences:
>Translated_56_residues MFLPMVGLWGLNLASDEFLIIEFFANQYVLNEPQVGSFLLFGPCLVLSISQGWKAK >Mature_56_residues MFLPMVGLWGLNLASDEFLIIEFFANQYVLNEPQVGSFLLFGPCLVLSISQGWKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6294; Mature: 6294
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLPMVGLWGLNLASDEFLIIEFFANQYVLNEPQVGSFLLFGPCLVLSISQGWKAK CCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECCEEEEECCCCCCCC >Mature Secondary Structure MFLPMVGLWGLNLASDEFLIIEFFANQYVLNEPQVGSFLLFGPCLVLSISQGWKAK CCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA