| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080595
Identifier: 227080595
GI number: 227080595
Start: 381248
End: 381517
Strand: Direct
Name: 227080595
Synonym: VCM66_0368
Alternate gene names: NA
Gene position: 381248-381517 (Clockwise)
Preceding gene: 227080594
Following gene: 227080596
Centisome position: 13.18
GC content: 46.3
Gene sequence:
>270_bases ATGCTTAGTTTTATCAATAAGCCAAGGATGGAAAGCAAAATGACGATTCCGGAGTTAAGAGAGCTATATCAAACCCAGCA GCTCGTTGAGGCCATTATTGAGCCCTCCTTTCAAGAAGGGGAATGGATTGTCGAATTTCGCCATCAAATGGGGGGATTCG TGCTGCTCACCGATGAAAATGGCGAAGAGTGTCGTTATATCGATCTCGATAGCGCTTCGCAATCCGCCATGGCGGTTGGG TTTCGTCAAGTTCGAATTGAAAACCAGTAG
Upstream 100 bases:
>100_bases GGCTCAATTTAGCTTCTGATGAATTTCTCATTATTGAGTTTTTTGCTAACCAATACGTTTTAAATGAGCCACAAGTTGGC TCATTTTTACTATTTGGACC
Downstream 100 bases:
>100_bases CGAGATGGTTAAGTCAAAAAGTTATAAAACATTCACATCTATTCTTTCTTGTTATTAAAAAGAGTGATTAATCTATCGTC ATGCAATGAATAGGGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG FRQVRIENQ
Sequences:
>Translated_89_residues MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG FRQVRIENQ >Mature_89_residues MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG FRQVRIENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10385; Mature: 10385
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDEN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCC GEECRYIDLDSASQSAMAVGFRQVRIENQ CCCEEEEECCCCCCHHHHHHHEEEEECCC >Mature Secondary Structure MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDEN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCC GEECRYIDLDSASQSAMAVGFRQVRIENQ CCCEEEEECCCCCCHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA