Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080595

Identifier: 227080595

GI number: 227080595

Start: 381248

End: 381517

Strand: Direct

Name: 227080595

Synonym: VCM66_0368

Alternate gene names: NA

Gene position: 381248-381517 (Clockwise)

Preceding gene: 227080594

Following gene: 227080596

Centisome position: 13.18

GC content: 46.3

Gene sequence:

>270_bases
ATGCTTAGTTTTATCAATAAGCCAAGGATGGAAAGCAAAATGACGATTCCGGAGTTAAGAGAGCTATATCAAACCCAGCA
GCTCGTTGAGGCCATTATTGAGCCCTCCTTTCAAGAAGGGGAATGGATTGTCGAATTTCGCCATCAAATGGGGGGATTCG
TGCTGCTCACCGATGAAAATGGCGAAGAGTGTCGTTATATCGATCTCGATAGCGCTTCGCAATCCGCCATGGCGGTTGGG
TTTCGTCAAGTTCGAATTGAAAACCAGTAG

Upstream 100 bases:

>100_bases
GGCTCAATTTAGCTTCTGATGAATTTCTCATTATTGAGTTTTTTGCTAACCAATACGTTTTAAATGAGCCACAAGTTGGC
TCATTTTTACTATTTGGACC

Downstream 100 bases:

>100_bases
CGAGATGGTTAAGTCAAAAAGTTATAAAACATTCACATCTATTCTTTCTTGTTATTAAAAAGAGTGATTAATCTATCGTC
ATGCAATGAATAGGGAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG
FRQVRIENQ

Sequences:

>Translated_89_residues
MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG
FRQVRIENQ
>Mature_89_residues
MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDENGEECRYIDLDSASQSAMAVG
FRQVRIENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10385; Mature: 10385

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDEN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCC
GEECRYIDLDSASQSAMAVGFRQVRIENQ
CCCEEEEECCCCCCHHHHHHHEEEEECCC
>Mature Secondary Structure
MLSFINKPRMESKMTIPELRELYQTQQLVEAIIEPSFQEGEWIVEFRHQMGGFVLLTDEN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCC
GEECRYIDLDSASQSAMAVGFRQVRIENQ
CCCEEEEECCCCCCHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA