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The map label for this gene is yqiC [H]

Identifier: 227080396

GI number: 227080396

Start: 159304

End: 159555

Strand: Reverse

Name: yqiC [H]

Synonym: VCM66_0162

Alternate gene names: 227080396

Gene position: 159555-159304 (Counterclockwise)

Preceding gene: 227080397

Following gene: 227080394

Centisome position: 5.52

GC content: 46.03

Gene sequence:

>252_bases
ATGTTTGATGCCAAAAAACTCGAGCAGATCGCCAAGCAAATCCATGAAGCCATGCCACAACCCGTCAAAGAACTGGGTGC
TGATGTAGAACAGAAAGTGCGTCAAGTCATTCAAGGCCAACTGAACAAACTGGATGTGGTCAGCCGCGAAGAGTTTGATG
TGCAAACTCAAGTGCTGTTACGCACTCGCCAAAAGCTCACTGAGTTAGAGCAGAAAATGGCTGAGCTTGAAGCCAAATTA
GCGGATAAATAA

Upstream 100 bases:

>100_bases
CATCACAAAAGGCCATTTCGATGGCCTTTTTTATTATCCAATCTAACGACATCGCTAGCTGAATTGCATAGAATATTGGC
AACTTAACAGGAGAATTACT

Downstream 100 bases:

>100_bases
GCGCTGAGTTCATACAGTAAACACGCCACTTAGCACTCAATAAAGAAAGGCTTAGTCATTCGACTAAGCCTTCTTGGTTT
TTATTATAGTGTGTTGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MFDAKKLEQIAKQIHEAMPQPVKELGADVEQKVRQVIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTELEQKMAELEAKL
ADK

Sequences:

>Translated_83_residues
MFDAKKLEQIAKQIHEAMPQPVKELGADVEQKVRQVIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTELEQKMAELEAKL
ADK
>Mature_83_residues
MFDAKKLEQIAKQIHEAMPQPVKELGADVEQKVRQVIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTELEQKMAELEAKL
ADK

Specific function: Unknown

COG id: COG2960

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082201, Length=79, Percent_Identity=64.5569620253165, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007475 [H]

Pfam domain/function: PF04380 DUF526 [H]

EC number: NA

Molecular weight: Translated: 9600; Mature: 9600

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDAKKLEQIAKQIHEAMPQPVKELGADVEQKVRQVIQGQLNKLDVVSREEFDVQTQVLL
CCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRQKLTELEQKMAELEAKLADK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDAKKLEQIAKQIHEAMPQPVKELGADVEQKVRQVIQGQLNKLDVVSREEFDVQTQVLL
CCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRQKLTELEQKMAELEAKLADK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]