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The map label for this gene is mioC

Identifier: 227080239

GI number: 227080239

Start: 372

End: 806

Strand: Reverse

Name: mioC

Synonym: VCM66_0002

Alternate gene names: 227080239

Gene position: 806-372 (Counterclockwise)

Preceding gene: 227080240

Following gene: 227080238

Centisome position: 0.03

GC content: 50.11

Gene sequence:

>435_bases
ATGATTCATATCATTACTGGCAGCACCCTAGGCGGTGCGGAATATGTGGGTGACCACCTGAGTGATTTACTGCAAGAACA
AGGCTTTGACACCAAAATTCATAACCAGCCCAACATGAGTGAGATCCCTGCTAAAGGGACTTGGCTGATCATCACCTCAA
CCCACGGGGCTGGTGAGTACCCGGATAATATCCAGCCCTTTATTCAGGCTCTGCAGAATACACCACCGAATACCTCTGCA
CTACGTTATGCCGTGGTCGCGATTGGTGATTCAAGCTACGATACTTTCTGCGCGGCAGGTAAACATGCCTATCAGCTGCT
GGGGGATATTGGTGCTAAACCTCTGGCCAACTGCTTTACCATCGATGTACAAGAGCACCCAGTGCCTGAAGATGCCGCTG
AAGCTTGGCTCAAACGCGTCATCAATCGCTTCTAA

Upstream 100 bases:

>100_bases
AGCCCAGCAACACCTTAACGAAATTACGGGCGAGTTCAGCTCCGATGATCTGCTTGGCCGCATTTTTTCATCATTCTGTA
TTGGGAAATAGAGTAACGCT

Downstream 100 bases:

>100_bases
ATAATGACCTATTCCATGCAGAGCGGCTTAATGCCGCTCTTTTTTTTGGATTGTGGATAAATTTAACGGTAGTGAAAAAA
TTGATTGATGCTTTTTCAAT

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIHIITGSTLGGAEYVGDHLSDLLQEQGFDTKIHNQPNMSEIPAKGTWLIITSTHGAGEYPDNIQPFIQALQNTPPNTSA
LRYAVVAIGDSSYDTFCAAGKHAYQLLGDIGAKPLANCFTIDVQEHPVPEDAAEAWLKRVINRF

Sequences:

>Translated_144_residues
MIHIITGSTLGGAEYVGDHLSDLLQEQGFDTKIHNQPNMSEIPAKGTWLIITSTHGAGEYPDNIQPFIQALQNTPPNTSA
LRYAVVAIGDSSYDTFCAAGKHAYQLLGDIGAKPLANCFTIDVQEHPVPEDAAEAWLKRVINRF
>Mature_144_residues
MIHIITGSTLGGAEYVGDHLSDLLQEQGFDTKIHNQPNMSEIPAKGTWLIITSTHGAGEYPDNIQPFIQALQNTPPNTSA
LRYAVVAIGDSSYDTFCAAGKHAYQLLGDIGAKPLANCFTIDVQEHPVPEDAAEAWLKRVINRF

Specific function: Probable electron transporter required for biotin synthase activity

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1790181, Length=141, Percent_Identity=46.8085106382979, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1789154, Length=140, Percent_Identity=32.8571428571429, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1789123, Length=144, Percent_Identity=29.8611111111111, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MIOC_VIBCH (Q9KVY6)

Other databases:

- EMBL:   AE003852
- PIR:   C82375
- RefSeq:   NP_062586.1
- ProteinModelPortal:   Q9KVY6
- SMR:   Q9KVY6
- GeneID:   2615827
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0002
- TIGR:   VC_0002
- HOGENOM:   HBG686708
- OMA:   IWLVVTS
- ProtClustDB:   PRK09004
- GO:   GO:0006810
- InterPro:   IPR008254

Pfam domain/function: PF00258 Flavodoxin_1

EC number: NA

Molecular weight: Translated: 15663; Mature: 15663

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHIITGSTLGGAEYVGDHLSDLLQEQGFDTKIHNQPNMSEIPAKGTWLIITSTHGAGEY
CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
PDNIQPFIQALQNTPPNTSALRYAVVAIGDSSYDTFCAAGKHAYQLLGDIGAKPLANCFT
CCCHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCCCCEEE
IDVQEHPVPEDAAEAWLKRVINRF
ECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIHIITGSTLGGAEYVGDHLSDLLQEQGFDTKIHNQPNMSEIPAKGTWLIITSTHGAGEY
CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
PDNIQPFIQALQNTPPNTSALRYAVVAIGDSSYDTFCAAGKHAYQLLGDIGAKPLANCFT
CCCHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCCCCEEE
IDVQEHPVPEDAAEAWLKRVINRF
ECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301