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The map label for this gene is soj [H]

Identifier: 226951091

GI number: 226951091

Start: 4146998

End: 4147762

Strand: Reverse

Name: soj [H]

Synonym: CLM_4144

Alternate gene names: 226951091

Gene position: 4147762-4146998 (Counterclockwise)

Preceding gene: 226951092

Following gene: 226951090

Centisome position: 99.82

GC content: 29.02

Gene sequence:

>765_bases
TTGAAAGTAGTATCTATTTTTAATCAAAAAGGTGGTGTAGGCAAGACTACAACCAGTATAAATTTATGTTCATGCCTAGC
CATGAATGGATATAAAATATTAAATATAGACATAGATCCTCAAGGAAATACCACCAGCGGAATGGGATTAGATAAAAATA
GCTTAGAACTCTCAGTGTATGATGTTTTAACATCTGATGAAATATCAATAAAGGAAGCCATAAAACAAAGTGAACTTATA
AGCAATTTTTATATTTTACCATCAACTATGTCTTTAGCTGGTGCTGAAATAGAATTGATAAATAAATTGGATAGGGAAAG
AATTCTTTTACAAAAATTAAAAGAAATAGAGAATGATTTTGACTATGTATTTATTGATTGTCCACCTTCATTAGGTTTGC
TAACAATTAATGCATTGGCAGCGTCTGATAGTGTTTTAATTCCTATACAATGTGAATTTTATTCATTAGAAGGAGTAGGT
CAATTAGTTAATACTATTGAGCTAGTACAAAAATCTCTTAATTCCAATTTGGAGGTTGAAGGTGTAATACTGTCTATGTA
TGATATTAGGACTAGATTATGTAATGAAGTTGCGGAAGAAGTAAAAAAATATTTTAATGATAAGGTATATAAGACCACAA
TCCCTAGAAATGTAAGATTAGCAGAAGCTCCTAGTTTCGGACTACCTATAATATTATATGATTCTAAATGTAAAGGGGCA
GAAGCATATAATAATTTAAGTAAAGAATTTATAGAAAAACAATAA

Upstream 100 bases:

>100_bases
ATTTTTTATTAAATTTTAATAAAGTATATGTAAAAGACTTTAATTATTTTACTTTAAATTATATAATTAAGAGTAGAATA
ATTAATTAGGTGGTGAGGAA

Downstream 100 bases:

>100_bases
AAGGAGGATATAAGGTTGAATAAAAAATCAGCATTAGGAAAGGGATTAGGGGCATTAATTCCTGAAAAGCCTCAAGAAAA
TAAAGATAGTATAAATACTA

Product: sporulation initiation inhibitor protein soj

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKVVSIFNQKGGVGKTTTSINLCSCLAMNGYKILNIDIDPQGNTTSGMGLDKNSLELSVYDVLTSDEISIKEAIKQSELI
SNFYILPSTMSLAGAEIELINKLDRERILLQKLKEIENDFDYVFIDCPPSLGLLTINALAASDSVLIPIQCEFYSLEGVG
QLVNTIELVQKSLNSNLEVEGVILSMYDIRTRLCNEVAEEVKKYFNDKVYKTTIPRNVRLAEAPSFGLPIILYDSKCKGA
EAYNNLSKEFIEKQ

Sequences:

>Translated_254_residues
MKVVSIFNQKGGVGKTTTSINLCSCLAMNGYKILNIDIDPQGNTTSGMGLDKNSLELSVYDVLTSDEISIKEAIKQSELI
SNFYILPSTMSLAGAEIELINKLDRERILLQKLKEIENDFDYVFIDCPPSLGLLTINALAASDSVLIPIQCEFYSLEGVG
QLVNTIELVQKSLNSNLEVEGVILSMYDIRTRLCNEVAEEVKKYFNDKVYKTTIPRNVRLAEAPSFGLPIILYDSKCKGA
EAYNNLSKEFIEKQ
>Mature_254_residues
MKVVSIFNQKGGVGKTTTSINLCSCLAMNGYKILNIDIDPQGNTTSGMGLDKNSLELSVYDVLTSDEISIKEAIKQSELI
SNFYILPSTMSLAGAEIELINKLDRERILLQKLKEIENDFDYVFIDCPPSLGLLTINALAASDSVLIPIQCEFYSLEGVG
QLVNTIELVQKSLNSNLEVEGVILSMYDIRTRLCNEVAEEVKKYFNDKVYKTTIPRNVRLAEAPSFGLPIILYDSKCKGA
EAYNNLSKEFIEKQ

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28242; Mature: 28242

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVSIFNQKGGVGKTTTSINLCSCLAMNGYKILNIDIDPQGNTTSGMGLDKNSLELSVY
CCEEEEECCCCCCCCCCCHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE
DVLTSDEISIKEAIKQSELISNFYILPSTMSLAGAEIELINKLDRERILLQKLKEIENDF
EEECCCCHHHHHHHHHHHHHHCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DYVFIDCPPSLGLLTINALAASDSVLIPIQCEFYSLEGVGQLVNTIELVQKSLNSNLEVE
CEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEE
GVILSMYDIRTRLCNEVAEEVKKYFNDKVYKTTIPRNVRLAEAPSFGLPIILYDSKCKGA
EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCEEEEECCCCCCH
EAYNNLSKEFIEKQ
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKVVSIFNQKGGVGKTTTSINLCSCLAMNGYKILNIDIDPQGNTTSGMGLDKNSLELSVY
CCEEEEECCCCCCCCCCCHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE
DVLTSDEISIKEAIKQSELISNFYILPSTMSLAGAEIELINKLDRERILLQKLKEIENDF
EEECCCCHHHHHHHHHHHHHHCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DYVFIDCPPSLGLLTINALAASDSVLIPIQCEFYSLEGVGQLVNTIELVQKSLNSNLEVE
CEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEE
GVILSMYDIRTRLCNEVAEEVKKYFNDKVYKTTIPRNVRLAEAPSFGLPIILYDSKCKGA
EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCEEEEECCCCCCH
EAYNNLSKEFIEKQ
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]