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The map label for this gene is noc [H]

Identifier: 226951092

GI number: 226951092

Start: 4147886

End: 4148665

Strand: Reverse

Name: noc [H]

Synonym: CLM_4145

Alternate gene names: 226951092

Gene position: 4148665-4147886 (Counterclockwise)

Preceding gene: 226951093

Following gene: 226951091

Centisome position: 99.84

GC content: 26.28

Gene sequence:

>780_bases
ATGCAAAAAAATATAAATTATATTTCCACTGATAAAATTATTCCTAATTTATATCAACCTAGAAAATATTTTAATGAGGA
AAGTATAGAAGAGCTAGCGCAATCAATAAAAGTGTATGGTATAATTCAGCCATTATCTGTTAGAAAGATAAAAGATGGTG
AATATGAATTAGTTGCTGGGGAGAGAAGATTAAGGGCAGCTAAAAAATTGGGTTTAAATGAAGTTCCAGCAGTTATTATA
GATGTTACAGATAAGGATTCCGCAGCAATAGCCTTGTTAGAAAATTTACAAAGAGAAGATTTAAATTGTTTTGAGGAAGC
AGAAGCTTATCATAATTTAATACAAGAACATTTTTATACTCAAGATAAATTATCTGAAGTGATTGGGAAAAAGCAATCTA
CTATAGCAAATAAAATGAGATTATTAAAATTACCTAAAGAAGTTAGGGAAAAAATATTAGAAAATAATTTAACAGAGAGG
CATGGCAGGGCTCTGTTAAAAATTAATGATAAAGATAAACAATTAAAAATATTGGCTATTGTTATAGAAAAAAAATTAAA
TGTCAAAAATACAGAAGAATTAATAGAAAAGGAATTATGTGATGATAGCAATAAAAATTTAGCTTCTGATGGTAAAAAAA
GAATAAAAGGAATTTTTTCACCAGTAGTTTATGTTAATACAGTAAAACAGGTTTTTGATAAGTATGGTGTTAAGGCAAAT
TACAGATCTAAAGATCTAGATGATAAAATACAAATAACAATAACAATACCTAAAAAATAG

Upstream 100 bases:

>100_bases
AATGTAATAATTTGCAATTAAAAAAATAATAAAAAAAGAAGGAAAATTACATTTAAAGAAGAAATGTAAATATTAGGAAG
AGAATAAGAGGGATGGTAGT

Downstream 100 bases:

>100_bases
TAGATGTTTCACGTGAAACATCTATTTTTTATTAAATTTTAATAAAGTATATGTAAAAGACTTTAATTATTTTACTTTAA
ATTATATAATTAAGAGTAGA

Product: parB family protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Sequences:

>Translated_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK
>Mature_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29854; Mature: 29854

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCHHEEECCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEHHHE
VIEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EEHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVRKIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCHHEEECCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLPKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEHHHE
VIEKKLNVKNTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EEHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA