Click here to switch to the map view.

The map label for this gene is yccU [C]

Identifier: 226951064

GI number: 226951064

Start: 4122666

End: 4123040

Strand: Reverse

Name: yccU [C]

Synonym: CLM_4117

Alternate gene names: 226951064

Gene position: 4123040-4122666 (Counterclockwise)

Preceding gene: 226951066

Following gene: 226951063

Centisome position: 99.22

GC content: 27.47

Gene sequence:

>375_bases
TTGAAAGCTTATGATTTTCTAGATTATAAAAATTGGGCTGTGGCAGGTAGTGTACTTAGTGAGGATAAATATGCATATAA
AATATTTAATAGACTAAAAGAAAAGGGATATAATGTAGTAGGAATAAAACCAGGTGTAGAAGAAAAAGATGTATTTAATA
ATATTAGAGACATACCTTATAACATAGAGGTATTAGATTTATGTATCAATCCAATAAAGGGCCTGGATATAGTAAAAGAA
GCATCAAAACTAGGAATAAATAAAATACTAATTCAACCAGGAGCAGAAAGTAATGAAATAATAAATTTTTGCAGAGAAAA
TAATATTAATGCTATAGAAGGCTGTGCTTTAGTAGAATTATCAAAATTAGTGTAG

Upstream 100 bases:

>100_bases
TTATATATAAGTATAACAAAATAGTTTATATGAATTTATAAAATTTTAATGTTTATAATAAATATTATAATATTTATTAT
AAATAAAAGGAGGTATACTT

Downstream 100 bases:

>100_bases
AGGAGAGAGGCTATGTTTAAGATATATGCTGTGTCAGATTCTATTGGTGAAACTGCAGAACAAGTAGCTAATGCTACAGC
ATACCAATTTGGTAGTTCTG

Product: CoA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKAYDFLDYKNWAVAGSVLSEDKYAYKIFNRLKEKGYNVVGIKPGVEEKDVFNNIRDIPYNIEVLDLCINPIKGLDIVKE
ASKLGINKILIQPGAESNEIINFCRENNINAIEGCALVELSKLV

Sequences:

>Translated_124_residues
MKAYDFLDYKNWAVAGSVLSEDKYAYKIFNRLKEKGYNVVGIKPGVEEKDVFNNIRDIPYNIEVLDLCINPIKGLDIVKE
ASKLGINKILIQPGAESNEIINFCRENNINAIEGCALVELSKLV
>Mature_124_residues
MKAYDFLDYKNWAVAGSVLSEDKYAYKIFNRLKEKGYNVVGIKPGVEEKDVFNNIRDIPYNIEVLDLCINPIKGLDIVKE
ASKLGINKILIQPGAESNEIINFCRENNINAIEGCALVELSKLV

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13967; Mature: 13967

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYDFLDYKNWAVAGSVLSEDKYAYKIFNRLKEKGYNVVGIKPGVEEKDVFNNIRDIPY
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCC
NIEVLDLCINPIKGLDIVKEASKLGINKILIQPGAESNEIINFCRENNINAIEGCALVEL
CHHHHEEHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
SKLV
HHCC
>Mature Secondary Structure
MKAYDFLDYKNWAVAGSVLSEDKYAYKIFNRLKEKGYNVVGIKPGVEEKDVFNNIRDIPY
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCC
NIEVLDLCINPIKGLDIVKEASKLGINKILIQPGAESNEIINFCRENNINAIEGCALVEL
CHHHHEEHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
SKLV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA