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The map label for this gene is 226951066

Identifier: 226951066

GI number: 226951066

Start: 4124552

End: 4125301

Strand: Reverse

Name: 226951066

Synonym: CLM_4119

Alternate gene names: NA

Gene position: 4125301-4124552 (Counterclockwise)

Preceding gene: 226951067

Following gene: 226951064

Centisome position: 99.28

GC content: 25.47

Gene sequence:

>750_bases
ATGCAACCAGTAATAACAGATAAGAATTTTGAAATAAATTATCATGAGATAGACTTTAAAAAAAGGGTATTATTTACTAC
TATAATGAACTACTTTGAAGATGCTTCTTTGGAACAATCTGAAAAGTTAGGTGTAGGATTACAATATTTAAAAGAAAATG
AGCAAGCTTGGGTATTATATAAATGGAATGTAACTATCGATAGATATCCTGAATTTGGAGAAAAAATAATAGTAAGAACT
ATACCATTATCTTATAGAAAATTTTATGCCTATAGAAGATTTCAAATAATAGATAAAACAGGAAAGGTAATAGTAACAGG
AGATAGTATATGGTTTTTAATAGATATAAATAAGAGAAGGCCTATAAAAGTTACTGAAGATATGCAAAATGCTTATGGGT
TAAGTGAAACTAAAGAAGAACCTTTTAAAATAGATAAAATAAAGTTCCCAGAAGAATTTCATTATAACAATAAGTTTAAG
GTAAGATATAGTGATATAGATACAAATTTGCATGTAAACAATGTAAAATATATATCTTGGGCTATAGAAACAATACCATT
TGATATAGTATTAAACTATACTTTAAAGAATTTTGTTATAACCTATGAAAAAGAAGTAAAGTATGGAAATGATATAAATG
TATACTCAGAAATGGTACATAATGATAACAATGAAATAATCTTTGTGCATAAAGTAGAAAATGAAGAGGGAAAAAGAGTT
ACCTCAGCAAAAAGTATTTGGGTTAAATAA

Upstream 100 bases:

>100_bases
TAAAAAAACTCTATGTTTTAGCATAGAGTTTTTTTATTAAGTTTATATTTGCTAAAAAATTTGTTATTATTAAATTATAT
TTTATAATAGGGGGGATAAA

Downstream 100 bases:

>100_bases
ATATTTTTATTATGAAAAATAAAGGAGATATTTATAAATTGCTAGAAAGTGTTTCCTAATTGAAAAAATTAATTTAGAAG
CATTTCTAGCAATTTATTTT

Product: acyl-ACP thioesterase family protein

Products: NA

Alternate protein names: Acyl-Acyl Carrier Protein Thioesterase; Acyl-ACP Thioesterase Family Protein; Oleoyl-[Acyl-Carrier Protein] Thioesterase; Oleoyl-(Acyl-Carrier Protein) Thioesterase; AcyL-Acp Thioesterase; Thioesterase Acyl-ACP Family; Oleoyl-[Acyl-Carrier-Protein] Hydrolase; Acyl-[Acyl-Carrier-Protein] Thioesterase; Oleoyl-Acyl Carrier Protein Thioesterase; Acyl-Acyl-Carrier Protein Thioesterase; Acyl-Acp Thioesterase; Acyl Carrier Protein Thioesterase-Like Protein; Acyl-ACP Thioesterase-Like

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQPVITDKNFEINYHEIDFKKRVLFTTIMNYFEDASLEQSEKLGVGLQYLKENEQAWVLYKWNVTIDRYPEFGEKIIVRT
IPLSYRKFYAYRRFQIIDKTGKVIVTGDSIWFLIDINKRRPIKVTEDMQNAYGLSETKEEPFKIDKIKFPEEFHYNNKFK
VRYSDIDTNLHVNNVKYISWAIETIPFDIVLNYTLKNFVITYEKEVKYGNDINVYSEMVHNDNNEIIFVHKVENEEGKRV
TSAKSIWVK

Sequences:

>Translated_249_residues
MQPVITDKNFEINYHEIDFKKRVLFTTIMNYFEDASLEQSEKLGVGLQYLKENEQAWVLYKWNVTIDRYPEFGEKIIVRT
IPLSYRKFYAYRRFQIIDKTGKVIVTGDSIWFLIDINKRRPIKVTEDMQNAYGLSETKEEPFKIDKIKFPEEFHYNNKFK
VRYSDIDTNLHVNNVKYISWAIETIPFDIVLNYTLKNFVITYEKEVKYGNDINVYSEMVHNDNNEIIFVHKVENEEGKRV
TSAKSIWVK
>Mature_249_residues
MQPVITDKNFEINYHEIDFKKRVLFTTIMNYFEDASLEQSEKLGVGLQYLKENEQAWVLYKWNVTIDRYPEFGEKIIVRT
IPLSYRKFYAYRRFQIIDKTGKVIVTGDSIWFLIDINKRRPIKVTEDMQNAYGLSETKEEPFKIDKIKFPEEFHYNNKFK
VRYSDIDTNLHVNNVKYISWAIETIPFDIVLNYTLKNFVITYEKEVKYGNDINVYSEMVHNDNNEIIFVHKVENEEGKRV
TSAKSIWVK

Specific function: Unknown

COG id: COG3884

COG function: function code I; Acyl-ACP thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29848; Mature: 29848

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPVITDKNFEINYHEIDFKKRVLFTTIMNYFEDASLEQSEKLGVGLQYLKENEQAWVLY
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHCCCCHHEEECCCCEEEEE
KWNVTIDRYPEFGEKIIVRTIPLSYRKFYAYRRFQIIDKTGKVIVTGDSIWFLIDINKRR
EEEEEEECCCCCCCEEEEEECCCHHHHHHHEEEEEEEECCCCEEEECCCEEEEEECCCCC
PIKVTEDMQNAYGLSETKEEPFKIDKIKFPEEFHYNNKFKVRYSDIDTNLHVNNVKYISW
CEEECHHHHHHCCCCCCCCCCEEEEEEECCHHHCCCCEEEEEEECCCCEEEECCEEEEEE
AIETIPFDIVLNYTLKNFVITYEKEVKYGNDINVYSEMVHNDNNEIIFVHKVENEEGKRV
EEECCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEE
TSAKSIWVK
ECCEEEEEC
>Mature Secondary Structure
MQPVITDKNFEINYHEIDFKKRVLFTTIMNYFEDASLEQSEKLGVGLQYLKENEQAWVLY
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHCCCCHHEEECCCCEEEEE
KWNVTIDRYPEFGEKIIVRTIPLSYRKFYAYRRFQIIDKTGKVIVTGDSIWFLIDINKRR
EEEEEEECCCCCCCEEEEEECCCHHHHHHHEEEEEEEECCCCEEEECCCEEEEEECCCCC
PIKVTEDMQNAYGLSETKEEPFKIDKIKFPEEFHYNNKFKVRYSDIDTNLHVNNVKYISW
CEEECHHHHHHCCCCCCCCCCEEEEEEECCHHHCCCCEEEEEEECCCCEEEECCEEEEEE
AIETIPFDIVLNYTLKNFVITYEKEVKYGNDINVYSEMVHNDNNEIIFVHKVENEEGKRV
EEECCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEE
TSAKSIWVK
ECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA