Click here to switch to the map view.

The map label for this gene is 226951040

Identifier: 226951040

GI number: 226951040

Start: 4100054

End: 4100731

Strand: Reverse

Name: 226951040

Synonym: CLM_4079

Alternate gene names: NA

Gene position: 4100731-4100054 (Counterclockwise)

Preceding gene: 226951045

Following gene: 226951031

Centisome position: 98.69

GC content: 26.7

Gene sequence:

>678_bases
ATGATAATAGATACTCATATACATGAAAGTAAATATTCATTAGATAGTGAAATATCCTTAGAAGAAATAGTAAAAAGAGG
AAAAGAAATAGGATTAGATGGAGTTTGTATTACAGATCATGAAAGTAGTGATATTATGGATGAAGCACATGCTTATTCAA
AAGCTACAGGATTTTTAATACTTGTTGGTGCTGAAATACTTACATATGAAGGTGATATATTAGTATTTGGATTAAAGGAT
ATACCTAAAAATAAAATGCATGCTAAAGATTTATTAAAAATAGTATATGAGAATAATGGAGTGGCTATTAGTGCCCACCC
ATATAGAAATAATAATAGAGGTATGGGTGATTATATAAGAGAAGCAAAAATGTTAGGATTATCTGGAGTAGAAGCTTTTA
ATGGTAGTACAGAACCCCATCAAAATTTATTAGCATATTCTTTAGCTACTGAGTTAAATCTTCCATGCATAGGATCTAGT
GATGCTCATGTTATAGAAAAGGTAGGTAAATATGCTACTGTATTTCCAAATGGAATAAGAGATGAAAAAGATCTAATACA
AGCTATAAAAGAAAATAATGTTTGTCCTGCTATGTATGATAATGGACAATATAAATATATAGATATATATAATAAAGTAA
TTAATAATTTAGATAAAAAAATATATAAAATTGTATAA

Upstream 100 bases:

>100_bases
TATAGGATATGACTATAATTTTATTTAATAAATCAACAAATGATTATAAAAAAATGATATTATCATATAATAGTGATAAA
TTATATCTTGGGAGGATTTT

Downstream 100 bases:

>100_bases
TACATTGCAAAATTTATTATTATAATTAAATACAAACAAAAAGAGATAATGTTGGATTCTTGAATATTATCTCTTTTATT
AAGGTATTATTAAAATTATA

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHAYSKATGFLILVGAEILTYEGDILVFGLKD
IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIREAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS
DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV

Sequences:

>Translated_225_residues
MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHAYSKATGFLILVGAEILTYEGDILVFGLKD
IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIREAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS
DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV
>Mature_225_residues
MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHAYSKATGFLILVGAEILTYEGDILVFGLKD
IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIREAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS
DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0417 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 25111; Mature: 25111

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHAYSKATGFLI
CEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE
LVGAEILTYEGDILVFGLKDIPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIR
EECCEEEEECCCEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHH
EAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSSDAHVIEKVGKYATVFPNGIR
HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC
DEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV
CHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHAYSKATGFLI
CEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE
LVGAEILTYEGDILVFGLKDIPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIR
EECCEEEEECCCEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHH
EAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSSDAHVIEKVGKYATVFPNGIR
HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC
DEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV
CHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]