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The map label for this gene is spoVT [H]

Identifier: 226950993

GI number: 226950993

Start: 4048462

End: 4049013

Strand: Reverse

Name: spoVT [H]

Synonym: CLM_4029

Alternate gene names: 226950993

Gene position: 4049013-4048462 (Counterclockwise)

Preceding gene: 226950994

Following gene: 226950992

Centisome position: 97.44

GC content: 29.71

Gene sequence:

>552_bases
ATGAAGGCAACAGGAATTGTTAGACGAATAGACGATTTAGGCAGAGTAGTTATACCAAAAGAAATAAGAAGAACTTTGAG
AATAAGAGAAGGGGATCCTCTTGAAATATTTACTGATAGGGAAGGTGGAGTAATATTAAAAAAATATTCACCAATAGGGG
ATTTAAGTGAATTTTCAAAAGGGTATACTGATTCCCTTCAGCAAACTATAGGTAATATAATTATGATTTGTGATAAAGAT
ACTATAATATCAATTAGTGGAGCCCCTAAAAAGGAATACTTAGAGAAAAAAATAAGTTATGATTTAGAAAAAATAATAGA
AGAAAGAAAAACTGTTTATTTTGGTGATGATAATAAAGCAGTCTCTATATATGATGATGAAGATGTAGATGAAAAGTATT
CAGCTCAAGTTATATCACCTATAATAGCTGAAGGAGATACTGTTGGAGCTGTAATAATAGTATCAAAAGAAGGTGGAAAG
AAATTTAATGAATTAGAGATGAAACTTGCAGAAACTGCTTCATCATTTTTAGGAAAACAAATGGAAGAATAA

Upstream 100 bases:

>100_bases
GTAAATAACAATTATGCATAAAATTTCATAAATAGAAAGATAATATTACTACATAATAATACTAATATATTTAATTTTTA
GTTAGAGGAGGAATAAAATA

Downstream 100 bases:

>100_bases
TTTGATATACTTAATATGAACCTGTGCTTAAGCACAGGTTTTATTAATAAACTATAAAATTATAAAAATAAAAGTAATAA
TAACTCAGTTTTTAAAATAC

Product: stage V sporulation protein T

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYSPIGDLSEFSKGYTDSLQQTIGNIIMICDKD
TIISISGAPKKEYLEKKISYDLEKIIEERKTVYFGDDNKAVSIYDDEDVDEKYSAQVISPIIAEGDTVGAVIIVSKEGGK
KFNELEMKLAETASSFLGKQMEE

Sequences:

>Translated_183_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYSPIGDLSEFSKGYTDSLQQTIGNIIMICDKD
TIISISGAPKKEYLEKKISYDLEKIIEERKTVYFGDDNKAVSIYDDEDVDEKYSAQVISPIIAEGDTVGAVIIVSKEGGK
KFNELEMKLAETASSFLGKQMEE
>Mature_183_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYSPIGDLSEFSKGYTDSLQQTIGNIIMICDKD
TIISISGAPKKEYLEKKISYDLEKIIEERKTVYFGDDNKAVSIYDDEDVDEKYSAQVISPIIAEGDTVGAVIIVSKEGGK
KFNELEMKLAETASSFLGKQMEE

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 20518; Mature: 20518

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYSPIGDLSEFSK
CCCHHHHHHHHHCCCEECCHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHC
GYTDSLQQTIGNIIMICDKDTIISISGAPKKEYLEKKISYDLEKIIEERKTVYFGDDNKA
CHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE
VSIYDDEDVDEKYSAQVISPIIAEGDTVGAVIIVSKEGGKKFNELEMKLAETASSFLGKQ
EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
MEE
CCC
>Mature Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYSPIGDLSEFSK
CCCHHHHHHHHHCCCEECCHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHC
GYTDSLQQTIGNIIMICDKDTIISISGAPKKEYLEKKISYDLEKIIEERKTVYFGDDNKA
CHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE
VSIYDDEDVDEKYSAQVISPIIAEGDTVGAVIIVSKEGGKKFNELEMKLAETASSFLGKQ
EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
MEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]