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The map label for this gene is yacP [H]

Identifier: 226950951

GI number: 226950951

Start: 3994021

End: 3994530

Strand: Reverse

Name: yacP [H]

Synonym: CLM_3968

Alternate gene names: 226950951

Gene position: 3994530-3994021 (Counterclockwise)

Preceding gene: 226950952

Following gene: 226950950

Centisome position: 96.13

GC content: 25.29

Gene sequence:

>510_bases
ATGAAATATATATTTGTAGATGCTTATAATGTCATAAATAGTTGGAAAGAATTAAAAAAGATAAAAGACTATAATTTAGA
AATGTCAAGAGAGCAACTATTGGATATATTAAACAATTATGCTTCATATAACCAATATCGTATTTATGTGGTTTTTGATG
CACATCAAACAGAAGGGGTAGAAAATACAGAAAAAATAAATGATAATTTAATAGTGGTGTTTACAAAAGAAGGAGAAACT
GCAGATAGCTTTATTGAAAGATCTATAAATGATTTAGGTAGAAAAATAGATGTATCTGTTGTAACATCAGATTCTTTAGA
ACAACAATTAATATTTCAAAGAGGAGCTACTAGAATATCTTCATTAGAATTTTATTCACAGGTTAAAGAAACAGAAAAAA
ACATAAAAGATAGAATAAAAAGGGAATTTTCTAGAAAAGGAAATAGATTAGAAGAGATATTGCAAGAGGATTTATTAGAA
AAATTGGAAAAAATAAGAAGAAGCACATAA

Upstream 100 bases:

>100_bases
AAATCCCAATGCTTGGGAATATAACATCTCTTAATGCATCTGTTGCTGGAGGAATGTTAATGTATGAAATATTAAAACAA
AGGATGAAGAGCAAATAATT

Downstream 100 bases:

>100_bases
TTTACCTTGACGTTGTTATTAACACTAATGTATAATCAAATATGTGGTTATATTTATTTTGGGGGGGGATACCTTGGATA
GAAAGGTTCAAATTAATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKYIFVDAYNVINSWKELKKIKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGVENTEKINDNLIVVFTKEGET
ADSFIERSINDLGRKIDVSVVTSDSLEQQLIFQRGATRISSLEFYSQVKETEKNIKDRIKREFSRKGNRLEEILQEDLLE
KLEKIRRST

Sequences:

>Translated_169_residues
MKYIFVDAYNVINSWKELKKIKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGVENTEKINDNLIVVFTKEGET
ADSFIERSINDLGRKIDVSVVTSDSLEQQLIFQRGATRISSLEFYSQVKETEKNIKDRIKREFSRKGNRLEEILQEDLLE
KLEKIRRST
>Mature_169_residues
MKYIFVDAYNVINSWKELKKIKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGVENTEKINDNLIVVFTKEGET
ADSFIERSINDLGRKIDVSVVTSDSLEQQLIFQRGATRISSLEFYSQVKETEKNIKDRIKREFSRKGNRLEEILQEDLLE
KLEKIRRST

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20030; Mature: 20030

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIFVDAYNVINSWKELKKIKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGV
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
ENTEKINDNLIVVFTKEGETADSFIERSINDLGRKIDVSVVTSDSLEQQLIFQRGATRIS
CHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCHHHH
SLEFYSQVKETEKNIKDRIKREFSRKGNRLEEILQEDLLEKLEKIRRST
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYIFVDAYNVINSWKELKKIKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGV
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
ENTEKINDNLIVVFTKEGETADSFIERSINDLGRKIDVSVVTSDSLEQQLIFQRGATRIS
CHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCHHHH
SLEFYSQVKETEKNIKDRIKREFSRKGNRLEEILQEDLLEKLEKIRRST
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]