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The map label for this gene is vorA [H]

Identifier: 226950873

GI number: 226950873

Start: 3929826

End: 3930356

Strand: Reverse

Name: vorA [H]

Synonym: CLM_3887

Alternate gene names: 226950873

Gene position: 3930356-3929826 (Counterclockwise)

Preceding gene: 226950874

Following gene: 226950872

Centisome position: 94.59

GC content: 33.52

Gene sequence:

>531_bases
ATGGCATCACAACAAATTATATTTGCAGGTTTTGGAGGCCAAGGTATATTATCAATGGGTAAATTTTTAGCTTATGCAGG
AATGGACGCAAATATGGAAGTTTCATGGTTACCATCTTATGGACCAGAAATGAGAGGAGGTACAGCTAACTGTTCTGTAG
TTCTATCTGATACACCAGTTGGATCACCAATAGTAACTAAACCAGATACAGTAGTTGTAATGAATAGACCTTCTTTAGAT
AAATTTGAAGATATGGTAGTTCCAGGTGGACTAATAATAATAGATTCTGACTTAGTTGATAGAATGCCAAAAAGAGATGA
CGTAAAAGTTATAGCTATACCAGCTCAATCTGAAGCAGACAAAATAAGTAGTAAAAAGATAGCTAATATGATTCTTTTAG
GAGCTCTTGTAAAAGAAACAGGAATAGTTACTATGGATGAAATAACAGCATCATTAAAAGACCATGGTAAGGAAAAATTC
TTTGAATTAAACAAAGAAGCCCTTAAAGCTGGAGAAGAATACGTAAAATAA

Upstream 100 bases:

>100_bases
GGATTAACTCCTCAAGAATCTATGGAATGGTTAAGGGAAAATATGATCCCATACTATCCTCTTGGCGTTAAGAAGGATAC
AACTGAGGAGGTGAAATAAT

Downstream 100 bases:

>100_bases
TGAATTAAATATTGCCAGTGGAGAAAATATCTTCACTGGCTTTTTATATTTTTCAATTATGTTTCCTATTGTTAGAATTA
GTAAACTATAATATAATATC

Product: 2-oxoacid:acceptor oxidoreductase subunit gamma

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate oxidoreductase alpha chain; 2-oxoisovalerate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MASQQIIFAGFGGQGILSMGKFLAYAGMDANMEVSWLPSYGPEMRGGTANCSVVLSDTPVGSPIVTKPDTVVVMNRPSLD
KFEDMVVPGGLIIIDSDLVDRMPKRDDVKVIAIPAQSEADKISSKKIANMILLGALVKETGIVTMDEITASLKDHGKEKF
FELNKEALKAGEEYVK

Sequences:

>Translated_176_residues
MASQQIIFAGFGGQGILSMGKFLAYAGMDANMEVSWLPSYGPEMRGGTANCSVVLSDTPVGSPIVTKPDTVVVMNRPSLD
KFEDMVVPGGLIIIDSDLVDRMPKRDDVKVIAIPAQSEADKISSKKIANMILLGALVKETGIVTMDEITASLKDHGKEKF
FELNKEALKAGEEYVK
>Mature_175_residues
ASQQIIFAGFGGQGILSMGKFLAYAGMDANMEVSWLPSYGPEMRGGTANCSVVLSDTPVGSPIVTKPDTVVVMNRPSLDK
FEDMVVPGGLIIIDSDLVDRMPKRDDVKVIAIPAQSEADKISSKKIANMILLGALVKETGIVTMDEITASLKDHGKEKFF
ELNKEALKAGEEYVK

Specific function: Unknown

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019752
- InterPro:   IPR002869
- InterPro:   IPR011766 [H]

Pfam domain/function: PF01558 POR; PF02775 TPP_enzyme_C [H]

EC number: NA

Molecular weight: Translated: 18939; Mature: 18808

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQQIIFAGFGGQGILSMGKFLAYAGMDANMEVSWLPSYGPEMRGGTANCSVVLSDTPV
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCC
GSPIVTKPDTVVVMNRPSLDKFEDMVVPGGLIIIDSDLVDRMPKRDDVKVIAIPAQSEAD
CCCEEECCCEEEEECCCCCHHHHHEECCCCEEEECCHHHHHCCCCCCEEEEEECCCCCHH
KISSKKIANMILLGALVKETGIVTMDEITASLKDHGKEKFFELNKEALKAGEEYVK
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
ASQQIIFAGFGGQGILSMGKFLAYAGMDANMEVSWLPSYGPEMRGGTANCSVVLSDTPV
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCC
GSPIVTKPDTVVVMNRPSLDKFEDMVVPGGLIIIDSDLVDRMPKRDDVKVIAIPAQSEAD
CCCEEECCCEEEEECCCCCHHHHHEECCCCEEEECCHHHHHCCCCCCEEEEEECCCCCHH
KISSKKIANMILLGALVKETGIVTMDEITASLKDHGKEKFFELNKEALKAGEEYVK
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]