Click here to switch to the map view.

The map label for this gene is vorA [H]

Identifier: 226950874

GI number: 226950874

Start: 3930358

End: 3931107

Strand: Reverse

Name: vorA [H]

Synonym: CLM_3888

Alternate gene names: 226950874

Gene position: 3931107-3930358 (Counterclockwise)

Preceding gene: 226950875

Following gene: 226950873

Centisome position: 94.61

GC content: 35.6

Gene sequence:

>750_bases
ATGGCTATAGTATATCAACCACCTAAAGCATTAATGGACGTTCCTACACATTATTGTCCAGGATGTACTCATGGTGTAAT
TCATAAATTAGTTGGAGAAGTAATTGATGAACTTGGAGTATTAGATAAAACAATAGGTGTTGCTCCAGTTGGATGTTCAG
TTTTAGCATATAACTATTTTGCCTGTGATATGTTTGAAGCTGCTCATGGTAGAGCACCAGCAGTTGCAACAGGTATAAAA
AGAGCTAATCCAGATTCAGTAGTATTTACTTATCAAGGAGATGGAGACTTAGCTGCAATAGGTACAGCTGAAATAGTTCA
CATTGCAACTAGAGGAGAAAATATTACAACAATATTCGTAAATAACTGTATATATGGAATGACAGGTGGACAAATGGCGC
CTACTACATTGCCAGGTCAAGTAACAGAAACAACACCTTATGGAAGAGATACAAGTTATGCAGGATTCCCAATAAGAGTA
TCAGAAATGATAGCTACTTTAACTGGGGCTTGCTATGTAGAAAGAGTAGCCGTAAATACAGTTCCAAATATATTAAAAGC
TAAAAAAGCAATAAAGAAAGCTTTCCAAAATCAAATAGATAAAAAAGGATTCTCTTTAGTTGAAGTATTATCAATATGCC
CAACTAACTGGGGATTAACTCCTCAAGAATCTATGGAATGGTTAAGGGAAAATATGATCCCATACTATCCTCTTGGCGTT
AAGAAGGATACAACTGAGGAGGTGAAATAA

Upstream 100 bases:

>100_bases
GAAGAAAACCAGTAGATTTTTATGGAAGAACAGGTGGAATGGTTCCAGATCCATCAGATATCCTAGAAAAAGTTAAATCT
ATAGTAGGAGGTGCTAAATA

Downstream 100 bases:

>100_bases
TATGGCATCACAACAAATTATATTTGCAGGTTTTGGAGGCCAAGGTATATTATCAATGGGTAAATTTTTAGCTTATGCAG
GAATGGACGCAAATATGGAA

Product: putative 2-oxoacid:acceptor oxidoreductase subunit beta

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate oxidoreductase alpha chain; 2-oxoisovalerate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAIVYQPPKALMDVPTHYCPGCTHGVIHKLVGEVIDELGVLDKTIGVAPVGCSVLAYNYFACDMFEAAHGRAPAVATGIK
RANPDSVVFTYQGDGDLAAIGTAEIVHIATRGENITTIFVNNCIYGMTGGQMAPTTLPGQVTETTPYGRDTSYAGFPIRV
SEMIATLTGACYVERVAVNTVPNILKAKKAIKKAFQNQIDKKGFSLVEVLSICPTNWGLTPQESMEWLRENMIPYYPLGV
KKDTTEEVK

Sequences:

>Translated_249_residues
MAIVYQPPKALMDVPTHYCPGCTHGVIHKLVGEVIDELGVLDKTIGVAPVGCSVLAYNYFACDMFEAAHGRAPAVATGIK
RANPDSVVFTYQGDGDLAAIGTAEIVHIATRGENITTIFVNNCIYGMTGGQMAPTTLPGQVTETTPYGRDTSYAGFPIRV
SEMIATLTGACYVERVAVNTVPNILKAKKAIKKAFQNQIDKKGFSLVEVLSICPTNWGLTPQESMEWLRENMIPYYPLGV
KKDTTEEVK
>Mature_248_residues
AIVYQPPKALMDVPTHYCPGCTHGVIHKLVGEVIDELGVLDKTIGVAPVGCSVLAYNYFACDMFEAAHGRAPAVATGIKR
ANPDSVVFTYQGDGDLAAIGTAEIVHIATRGENITTIFVNNCIYGMTGGQMAPTTLPGQVTETTPYGRDTSYAGFPIRVS
EMIATLTGACYVERVAVNTVPNILKAKKAIKKAFQNQIDKKGFSLVEVLSICPTNWGLTPQESMEWLRENMIPYYPLGVK
KDTTEEVK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019752
- InterPro:   IPR002869
- InterPro:   IPR011766 [H]

Pfam domain/function: PF01558 POR; PF02775 TPP_enzyme_C [H]

EC number: NA

Molecular weight: Translated: 26936; Mature: 26805

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVYQPPKALMDVPTHYCPGCTHGVIHKLVGEVIDELGVLDKTIGVAPVGCSVLAYNYF
CEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ACDMFEAAHGRAPAVATGIKRANPDSVVFTYQGDGDLAAIGTAEIVHIATRGENITTIFV
HHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCEEEEEE
NNCIYGMTGGQMAPTTLPGQVTETTPYGRDTSYAGFPIRVSEMIATLTGACYVERVAVNT
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VPNILKAKKAIKKAFQNQIDKKGFSLVEVLSICPTNWGLTPQESMEWLRENMIPYYPLGV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCC
KKDTTEEVK
CCCCHHHCC
>Mature Secondary Structure 
AIVYQPPKALMDVPTHYCPGCTHGVIHKLVGEVIDELGVLDKTIGVAPVGCSVLAYNYF
EEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ACDMFEAAHGRAPAVATGIKRANPDSVVFTYQGDGDLAAIGTAEIVHIATRGENITTIFV
HHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEECCEEEEEEEECCCCEEEEEE
NNCIYGMTGGQMAPTTLPGQVTETTPYGRDTSYAGFPIRVSEMIATLTGACYVERVAVNT
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VPNILKAKKAIKKAFQNQIDKKGFSLVEVLSICPTNWGLTPQESMEWLRENMIPYYPLGV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCC
KKDTTEEVK
CCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]