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The map label for this gene is 226950855

Identifier: 226950855

GI number: 226950855

Start: 3911890

End: 3912549

Strand: Reverse

Name: 226950855

Synonym: CLM_3868

Alternate gene names: NA

Gene position: 3912549-3911890 (Counterclockwise)

Preceding gene: 226950856

Following gene: 226950854

Centisome position: 94.16

GC content: 24.39

Gene sequence:

>660_bases
ATGGATAATAAATATAATAATCTTTTCTATTGGGAAAATTTACTGATAAAGAGAGAGAACATCTGGAGTGGAAACTTTAA
AGATATACCAATAAGCTCAAAATCTCTTTTTATTAACACTACCATAATAGATTATGAAAAAAATATTTTTGACAATAATT
GGGCTGTATATCCAAATGTGGAATCCCTTTTGGGGTTCGTACAATATATATTTATACCTACAGTTTTCTTTTGTTATGTA
GATAATACAAGTGAAGAAATAGTTACTCCTATAGTTTCTAAAGAAGAACTTCTAGAAGAAATAAAAACATTATGTAAAAA
TGAAGATTCTATAATTAAAATAGAATATTTTATTAATAAAGCATATGATTTATGTGAATTAAGTGAATGCCAGCTCATAG
ATGAGTTGAAAAAGTATTGCTTAGAATTTAATAGGAAATGGGAAGAAAAAACTAGAGTATTTCATATTAGTATATATTCT
AGTGGTAAAGAAATAATACAAAAAATTTCAAAAGAAGATGATTTCTTAGAAGTTATAGAGGAAGATATAGGTATGCCTAT
AAATACCCTAAAGGAAATCACAAAAGATTTACATCATAACTTATTTATGAAAAATAACTTTATAAAAATTTTGAACAACC
AAATAGGTTGTATAATTTAA

Upstream 100 bases:

>100_bases
CAACTTAAAAATAACTTTATACACCAATTTAAAAACAATATAAAATTTATATGTAACACAAAAATTATTTAACACAAACT
TTATACAAGAGGTATGCTAT

Downstream 100 bases:

>100_bases
TAATCTCATGATAAAAGTATAAAAATAAAGGATTAGATTTTCTAGTCCTTTATTTTTTATCATCTATTTTGAAATAAATC
TTTAATTTTTAAATATACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDNKYNNLFYWENLLIKRENIWSGNFKDIPISSKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVQYIFIPTVFFCYV
DNTSEEIVTPIVSKEELLEEIKTLCKNEDSIIKIEYFINKAYDLCELSECQLIDELKKYCLEFNRKWEEKTRVFHISIYS
SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII

Sequences:

>Translated_219_residues
MDNKYNNLFYWENLLIKRENIWSGNFKDIPISSKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVQYIFIPTVFFCYV
DNTSEEIVTPIVSKEELLEEIKTLCKNEDSIIKIEYFINKAYDLCELSECQLIDELKKYCLEFNRKWEEKTRVFHISIYS
SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII
>Mature_219_residues
MDNKYNNLFYWENLLIKRENIWSGNFKDIPISSKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVQYIFIPTVFFCYV
DNTSEEIVTPIVSKEELLEEIKTLCKNEDSIIKIEYFINKAYDLCELSECQLIDELKKYCLEFNRKWEEKTRVFHISIYS
SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26046; Mature: 26046

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKYNNLFYWENLLIKRENIWSGNFKDIPISSKSLFINTTIIDYEKNIFDNNWAVYPNV
CCCCCCCEEEEHHEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCH
ESLLGFVQYIFIPTVFFCYVDNTSEEIVTPIVSKEELLEEIKTLCKNEDSIIKIEYFINK
HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHH
AYDLCELSECQLIDELKKYCLEFNRKWEEKTRVFHISIYSSGKEIIQKISKEDDFLEVIE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHH
EDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII
HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MDNKYNNLFYWENLLIKRENIWSGNFKDIPISSKSLFINTTIIDYEKNIFDNNWAVYPNV
CCCCCCCEEEEHHEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCH
ESLLGFVQYIFIPTVFFCYVDNTSEEIVTPIVSKEELLEEIKTLCKNEDSIIKIEYFINK
HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHH
AYDLCELSECQLIDELKKYCLEFNRKWEEKTRVFHISIYSSGKEIIQKISKEDDFLEVIE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHH
EDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII
HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA