| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950831
Identifier: 226950831
GI number: 226950831
Start: 3885991
End: 3886599
Strand: Reverse
Name: 226950831
Synonym: CLM_3843
Alternate gene names: NA
Gene position: 3886599-3885991 (Counterclockwise)
Preceding gene: 226950832
Following gene: 226950830
Centisome position: 93.53
GC content: 29.72
Gene sequence:
>609_bases ATGAAAGGTAAAACACATGCGGGAGTAGGGATAGCGGTGTTTTTATCTATATATAGTAGATTGCCAGGAAACTTTAGTTA TTTAGGTTTGCTTGTAGTTTTTATATCCTCTTTACTTCCAGATATAGATCACCCAAAGAGTATATTTAATAAATATATAC TACTTTTTAAAAATAAGACTTCAAAAATAGCTTTTTATAGTTGTAGCGGTGTTTTAGTATTTTGGTATGACTATCTCTAT ACAAGAGAACCTGCCCTAAAGGCTTTAGCTATAATGCTAATAGTAATAGCCATATCTTCTCATAGAAACGGTCTTACTCA TAGTTTATTTGGTATGATTATATTTGCATTTATAGCAGGCTATTTAGGAAATATGTACAATATACATTATATGGTATATT ATCTTTTCATTGGTTATGGCAGTCATATTTTATGCGACATGGCTACCAATAGAGGGGTGCCACTTCTGTATCCCTTTAGC AAGAAGAAATTTAAATTTCCTGTGACTTACAAGAGCAATTCTAAAATAGCGACATTAATAGAAACTATACTAACTACTTC AGTTTTAATATTTACAATATATAAATTACCAATAATTTTTCCCAAATAA
Upstream 100 bases:
>100_bases CAAATAAAGGGCAAAAAAGTGCAATTTAATGATATAATATAAGAAATAAAGAAAAGAATTAAATAAAAAAATTAAAATAT TTTATATAGAGGAGAATTTT
Downstream 100 bases:
>100_bases TAGGAGTGATTAAGTGTTTGATTTAGAATACCAATTAAAAAACCTACCAGATAAACCTGGAGTATATTTAATGAAAAATA ATTTAGGGGAAATTATTTAT
Product: putative metal-dependent hydrolase, membrane-bound
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Membrane-Bound; Metal-Dependent Membrane Hydrolase
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIVIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK
Sequences:
>Translated_202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIVIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK >Mature_202_residues MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKTSKIAFYSCSGVLVFWYDYLY TREPALKALAIMLIVIAISSHRNGLTHSLFGMIIFAFIAGYLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFS KKKFKFPVTYKSNSKIATLIETILTTSVLIFTIYKLPIIFPK
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22919; Mature: 22919
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCC SKIAFYSCSGVLVFWYDYLYTREPALKALAIMLIVIAISSHRNGLTHSLFGMIIFAFIAG CEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFSKKKFKFPVTYKSNSKIATLI HHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHH ETILTTSVLIFTIYKLPIIFPK HHHHHHHHHHHHHHHHCEECCC >Mature Secondary Structure MKGKTHAGVGIAVFLSIYSRLPGNFSYLGLLVVFISSLLPDIDHPKSIFNKYILLFKNKT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECCC SKIAFYSCSGVLVFWYDYLYTREPALKALAIMLIVIAISSHRNGLTHSLFGMIIFAFIAG CEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YLGNMYNIHYMVYYLFIGYGSHILCDMATNRGVPLLYPFSKKKFKFPVTYKSNSKIATLI HHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHH ETILTTSVLIFTIYKLPIIFPK HHHHHHHHHHHHHHHHCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA