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The map label for this gene is 226950810

Identifier: 226950810

GI number: 226950810

Start: 3863487

End: 3864425

Strand: Reverse

Name: 226950810

Synonym: CLM_3821

Alternate gene names: NA

Gene position: 3864425-3863487 (Counterclockwise)

Preceding gene: 226950811

Following gene: 226950809

Centisome position: 93.0

GC content: 37.17

Gene sequence:

>939_bases
ATGAAAATAATGATAATAGGCGGTACTAATTTTATCGGGCCGGTTGTTGCAAGTTGTTTAGAAACGCAAGGGCACAATGT
CACCTTGTTTCATAGAGCGAAATCCCAGTTGCCACATTATGCTGAAGTACAGGGCGATTGTGACTCACCGGATGATTTAA
AAAAAGCTATTGAGCTAGTTTGTCCTGATATGATCATCCATATGATCGCTATGTATCAAAGCCATATTGAGGCACTGGAA
AAAGCTCTCGACGGCCAGAAAATGAAAGTTCTACTCATCTCAAGTATTGATGTTTATAAGGGCTTTGAAGTTTTTAATAA
ACTATCCTCTGCTCCGGTTGAGCCGATTCCATTTACAGAAAAATCTCCTTTACGGGATATTCGATTTCCGTATCGGGGAA
AGCCAGGTATTAACTTTGGATATTATTATGACAAAATTTTAGTTGAGCAAACCGCCTTGCAAAGCCCTGTGCTGGATACT
GTTATTGTGCGTCTCGGCATGGTTTACGGAAAAAATGATCCGAACCACCGATTTAAAGATATTATTTATCAAATGAATGA
CGGAGCAAAAACTATAAAAATAAATGAAAAAATTGCAGACTTAAAAACATGTAAATGCTATGTTGAGAACATTGCACAAG
GTATTGCTTTGGCAGCTCAGAAAGGTACTGTTGGTGAAATATACAATCTTGCTGATAATGGAATTTTCTCAGAACTTGAA
TGGAATAAAATCATTGCAAAGTTGATGGATTGGAATGGAGAATTTGTGATAACATACGAGGATAATGGTTGTGAGCTTGT
TAAAGCTGCAAACTTAGACCAGCATCTTGTGGTGGATTCCACTAAAGTACGAAAAGAACTGGATTTTACAGAAATCATTT
CTTTAGAAATTGGGCTGCTGAACACCATTCAATGGGAAGTTAATCATAATTTGCTCTAA

Upstream 100 bases:

>100_bases
TTATAATATCCCTATATGAAAATATCAACATGCCGTTTGCTGCGTAAACATTTTGATGTTAATAAAGCAAAAAAAGTAAA
GTATAAGGGGTGATATGAAA

Downstream 100 bases:

>100_bases
GATTTTTAAAGAGCTATTCATGTACTAAGCAGATGTCTTGCTGTAGCGCTAAGTCACTAAGAATTGAATAAATCATTTCA
ACCATACTTGGAAAAGGCGT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NAD Dependent Epimerase/Dehydratase Family; DTDP-Glucose 4 6-Dehydratase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKIMIIGGTNFIGPVVASCLETQGHNVTLFHRAKSQLPHYAEVQGDCDSPDDLKKAIELVCPDMIIHMIAMYQSHIEALE
KALDGQKMKVLLISSIDVYKGFEVFNKLSSAPVEPIPFTEKSPLRDIRFPYRGKPGINFGYYYDKILVEQTALQSPVLDT
VIVRLGMVYGKNDPNHRFKDIIYQMNDGAKTIKINEKIADLKTCKCYVENIAQGIALAAQKGTVGEIYNLADNGIFSELE
WNKIIAKLMDWNGEFVITYEDNGCELVKAANLDQHLVVDSTKVRKELDFTEIISLEIGLLNTIQWEVNHNLL

Sequences:

>Translated_312_residues
MKIMIIGGTNFIGPVVASCLETQGHNVTLFHRAKSQLPHYAEVQGDCDSPDDLKKAIELVCPDMIIHMIAMYQSHIEALE
KALDGQKMKVLLISSIDVYKGFEVFNKLSSAPVEPIPFTEKSPLRDIRFPYRGKPGINFGYYYDKILVEQTALQSPVLDT
VIVRLGMVYGKNDPNHRFKDIIYQMNDGAKTIKINEKIADLKTCKCYVENIAQGIALAAQKGTVGEIYNLADNGIFSELE
WNKIIAKLMDWNGEFVITYEDNGCELVKAANLDQHLVVDSTKVRKELDFTEIISLEIGLLNTIQWEVNHNLL
>Mature_312_residues
MKIMIIGGTNFIGPVVASCLETQGHNVTLFHRAKSQLPHYAEVQGDCDSPDDLKKAIELVCPDMIIHMIAMYQSHIEALE
KALDGQKMKVLLISSIDVYKGFEVFNKLSSAPVEPIPFTEKSPLRDIRFPYRGKPGINFGYYYDKILVEQTALQSPVLDT
VIVRLGMVYGKNDPNHRFKDIIYQMNDGAKTIKINEKIADLKTCKCYVENIAQGIALAAQKGTVGEIYNLADNGIFSELE
WNKIIAKLMDWNGEFVITYEDNGCELVKAANLDQHLVVDSTKVRKELDFTEIISLEIGLLNTIQWEVNHNLL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35140; Mature: 35140

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMIIGGTNFIGPVVASCLETQGHNVTLFHRAKSQLPHYAEVQGDCDSPDDLKKAIELV
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCEEECCCCCCCHHHHHHHHHHH
CPDMIIHMIAMYQSHIEALEKALDGQKMKVLLISSIDVYKGFEVFNKLSSAPVEPIPFTE
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
KSPLRDIRFPYRGKPGINFGYYYDKILVEQTALQSPVLDTVIVRLGMVYGKNDPNHRFKD
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH
IIYQMNDGAKTIKINEKIADLKTCKCYVENIAQGIALAAQKGTVGEIYNLADNGIFSELE
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHH
WNKIIAKLMDWNGEFVITYEDNGCELVKAANLDQHLVVDSTKVRKELDFTEIISLEIGLL
HHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEECCHHHHHHCCHHHHHHHEECEE
NTIQWEVNHNLL
EEEEEEECCCCC
>Mature Secondary Structure
MKIMIIGGTNFIGPVVASCLETQGHNVTLFHRAKSQLPHYAEVQGDCDSPDDLKKAIELV
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCEEECCCCCCCHHHHHHHHHHH
CPDMIIHMIAMYQSHIEALEKALDGQKMKVLLISSIDVYKGFEVFNKLSSAPVEPIPFTE
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
KSPLRDIRFPYRGKPGINFGYYYDKILVEQTALQSPVLDTVIVRLGMVYGKNDPNHRFKD
CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH
IIYQMNDGAKTIKINEKIADLKTCKCYVENIAQGIALAAQKGTVGEIYNLADNGIFSELE
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHH
WNKIIAKLMDWNGEFVITYEDNGCELVKAANLDQHLVVDSTKVRKELDFTEIISLEIGLL
HHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEECCHHHHHHCCHHHHHHHEECEE
NTIQWEVNHNLL
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA