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The map label for this gene is 226950706

Identifier: 226950706

GI number: 226950706

Start: 3727865

End: 3728509

Strand: Reverse

Name: 226950706

Synonym: CLM_3714

Alternate gene names: NA

Gene position: 3728509-3727865 (Counterclockwise)

Preceding gene: 226950709

Following gene: 226950705

Centisome position: 89.73

GC content: 25.74

Gene sequence:

>645_bases
ATGGTTCTAGAATCTAAGATGAAGTCTACTTCTAGTGGAAAGTTCCTAGAAAAAAAATTATTAAAGGAAAAAAGGTTATA
TGAAGCTGCTTATGAACTTTTTATAACAAAGGGTATAAATGATACTTCTATAGATGATATAGTAAAAAAAGCAGGGGTAG
CTAAGGGAACCTTCTATTTATATTTTAAAAACAAATATGATATTATTGATAGAATAATAATAAAGAAAAGTTTAGGTATA
ATCAAGGAAGCATTGAAGTATACTATGAGTGAGAGTAAGGGAGAGTTTATAGAATCAGTGCTTTGCTTTACAGACTATAT
AATAGAATATCTTAAAGATAATAAAAGATTATTAAAACTTATACATAAGAATTTATCCTGGGGTATATTTAGAAAGGCCC
TATTAAATTCTAGTCAAACAAAGGAAATTGCTGATATAAGAGATATATTTAAGAATATAATGATTAAACAACAAATAGAT
GAGAAGGAATTTGAGAAAAGGTTATTTATGATTATAGAACTAACAGGAACAGTCTGTTATAGTTCTATAATATTGGATGA
ACCATATCCTATAGAAGAAATGAAAGTATCTTTATTTGATGTTATAAGCAAAATACTAGAACCTTTATGTGAAAAAAATT
TATAA

Upstream 100 bases:

>100_bases
ATATAAAAACATAAAAACCTATTGATACTATTAGAAAAAGTTATATAATTAAATTAGGTAAAAATGACCTTAAGTCAATA
ATGAGTTAGGAGGACTTGGA

Downstream 100 bases:

>100_bases
GATAAAATAATTTTGAGATTATGGATTATACAATGTATATAGGGTAAACTAAATTAATAATTAAATAAAAAATAATTTTT
CTAGAGGTGTAATAATGGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVLESKMKSTSSGKFLEKKLLKEKRLYEAAYELFITKGINDTSIDDIVKKAGVAKGTFYLYFKNKYDIIDRIIIKKSLGI
IKEALKYTMSESKGEFIESVLCFTDYIIEYLKDNKRLLKLIHKNLSWGIFRKALLNSSQTKEIADIRDIFKNIMIKQQID
EKEFEKRLFMIIELTGTVCYSSIILDEPYPIEEMKVSLFDVISKILEPLCEKNL

Sequences:

>Translated_214_residues
MVLESKMKSTSSGKFLEKKLLKEKRLYEAAYELFITKGINDTSIDDIVKKAGVAKGTFYLYFKNKYDIIDRIIIKKSLGI
IKEALKYTMSESKGEFIESVLCFTDYIIEYLKDNKRLLKLIHKNLSWGIFRKALLNSSQTKEIADIRDIFKNIMIKQQID
EKEFEKRLFMIIELTGTVCYSSIILDEPYPIEEMKVSLFDVISKILEPLCEKNL
>Mature_214_residues
MVLESKMKSTSSGKFLEKKLLKEKRLYEAAYELFITKGINDTSIDDIVKKAGVAKGTFYLYFKNKYDIIDRIIIKKSLGI
IKEALKYTMSESKGEFIESVLCFTDYIIEYLKDNKRLLKLIHKNLSWGIFRKALLNSSQTKEIADIRDIFKNIMIKQQID
EKEFEKRLFMIIELTGTVCYSSIILDEPYPIEEMKVSLFDVISKILEPLCEKNL

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24986; Mature: 24986

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLESKMKSTSSGKFLEKKLLKEKRLYEAAYELFITKGINDTSIDDIVKKAGVAKGTFYL
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEE
YFKNKYDIIDRIIIKKSLGIIKEALKYTMSESKGEFIESVLCFTDYIIEYLKDNKRLLKL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IHKNLSWGIFRKALLNSSQTKEIADIRDIFKNIMIKQQIDEKEFEKRLFMIIELTGTVCY
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SSIILDEPYPIEEMKVSLFDVISKILEPLCEKNL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVLESKMKSTSSGKFLEKKLLKEKRLYEAAYELFITKGINDTSIDDIVKKAGVAKGTFYL
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEE
YFKNKYDIIDRIIIKKSLGIIKEALKYTMSESKGEFIESVLCFTDYIIEYLKDNKRLLKL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IHKNLSWGIFRKALLNSSQTKEIADIRDIFKNIMIKQQIDEKEFEKRLFMIIELTGTVCY
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SSIILDEPYPIEEMKVSLFDVISKILEPLCEKNL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA