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The map label for this gene is ysnB [H]

Identifier: 226950686

GI number: 226950686

Start: 3706641

End: 3707111

Strand: Reverse

Name: ysnB [H]

Synonym: CLM_3694

Alternate gene names: 226950686

Gene position: 3707111-3706641 (Counterclockwise)

Preceding gene: 226950687

Following gene: 226950685

Centisome position: 89.21

GC content: 29.3

Gene sequence:

>471_bases
TTGAAAATAGGTGTTATTAGTGATACCCATAGATATATAGGAGATGCTACTTCTCTTGTAAATAGTTTAGGTAATGTAAA
CTTAATAATTCATTTAGGAGATAATGTAGAGGATGTAAAAATGTTGTCTTCTGTTTATAAAGGGAAAATTATAAATGTAA
GAGGAAATTGTGATTTTTCAAAAGAAACTCCATCTGAATTAATAGAAAATATAGGAGGGAAAAGATTTTTTATAACTCAT
GGAAATAGATATGATGTGAAGTATGACTTAGCTAAATTAAGATATAGAGCATTAGAATTAGAAGCTGATATAGCCCTATT
TGGTCATACTCATGTATCTCAAATAGAGTATATAGATGGGATATGGTTTATTAACCCTGGTAGCCCTACACTTCCAAGAA
ATGGAGTTAGAAGTGTTGCTATTATAGGTATTGAGGGAGATAAAGTAGTGCCTATTATAAAAAAGATATAA

Upstream 100 bases:

>100_bases
ATGGATTCTCAAACTAAAAATTCTATAAGTCATAGGGGAGAAGCCTTTAGAAAATTAAAATGCGAATTAGAAAAAAATAT
ATAGATAAGGGGGGACAATT

Downstream 100 bases:

>100_bases
TGAAATTTTAAAAAACATAAAAAAAAATAAAAAAATGTATTGACGAATATAATTATATGATGTAGAATAGTTTATGTCGT
TGAGAGTTGCAAGAACAAAC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKIGVISDTHRYIGDATSLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYDLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI

Sequences:

>Translated_156_residues
MKIGVISDTHRYIGDATSLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYDLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
>Mature_156_residues
MKIGVISDTHRYIGDATSLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFSKETPSELIENIGGKRFFITH
GNRYDVKYDLAKLRYRALELEADIALFGHTHVSQIEYIDGIWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17351; Mature: 17351

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGVISDTHRYIGDATSLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFS
CEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCC
KETPSELIENIGGKRFFITHGNRYDVKYDLAKLRYRALELEADIALFGHTHVSQIEYIDG
CCCHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHEEEECCEEEECCCCHHEEEEECE
IWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
EEEECCCCCCCCCCCCCEEEEEEECCCEEEHHECCC
>Mature Secondary Structure
MKIGVISDTHRYIGDATSLVNSLGNVNLIIHLGDNVEDVKMLSSVYKGKIINVRGNCDFS
CEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCC
KETPSELIENIGGKRFFITHGNRYDVKYDLAKLRYRALELEADIALFGHTHVSQIEYIDG
CCCHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHEEEECCEEEECCCCHHEEEEECE
IWFINPGSPTLPRNGVRSVAIIGIEGDKVVPIIKKI
EEEECCCCCCCCCCCCCEEEEEEECCCEEEHHECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]