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The map label for this gene is frlC [C]

Identifier: 226950661

GI number: 226950661

Start: 3685538

End: 3686323

Strand: Reverse

Name: frlC [C]

Synonym: CLM_3645

Alternate gene names: 226950661

Gene position: 3686323-3685538 (Counterclockwise)

Preceding gene: 226950662

Following gene: 226950660

Centisome position: 88.71

GC content: 25.45

Gene sequence:

>786_bases
ATGAAAATAGGAATGTCTTCTGCCTGTTTGTATCCAAAAGTACCAATAGAGGAAAGCATATCAGTTATGAAAAGTTTAGG
ATTTAACATTGGGGAGATTTTTTTAAATACGTATAGTGAGTATAGTGAAGATTTTATAAAAACTTTACAGGAGCAAAAGG
AAGAAAATGATTTTTTAATAAATTCAATTCATGCATTTTCAAGTGTTTTTGAACCATATTTATTTGATTCATATAAAAGA
AGGCAAAGAGATATGCTTAAAATATTTAAAAAAGTATGTAGGGCAGGGAGCTTATTGAAAGCAAATTATTATACATTTCA
TGGCATGAGAAGAAATAATTTATTAGATTTAAACATGGATTATATTATAGATGTTTATAATGAATTAAATTATATTGCTA
ATGAAGAGGGGATAAAATTAGCTCAAGAAAATGTAGCTTGGTGTATGTCTTCAAATATAGATTTTTTAGATAAATTAAAT
GAAAAGTGTAACAACCAGTTGCATTACACATTGGATATTAAACAAGCTTTTAAAATAGGTAAAGATCCTATGGAATACAT
AAATGTAATGGGAAACAAAATAGTTAATGTTCATATAAATGATAGAGATGAGAGTAATATATGTCTTCTGCCTGGAAAAG
GGGATGTAGATTTAAAAAAAATATGTTGTAAATTAAAGGAAATGGGGTATAATAATGTTTATACTATAGAAGTTTACAAT
GATAATTATTCTTCATATTCAGAAATAATAGACTCAAAAGATTTTCTTCAAAATATTTTATTATGA

Upstream 100 bases:

>100_bases
AAATATTGAATAAATAAAATGAAACTAAAATTAATGGAGATATAAGAGTTTTAAGAGTGTATTAAGTGTGTACACTCTTG
CTTTATTTGAGGAGGTAAAT

Downstream 100 bases:

>100_bases
TGAAAAATATTGTAAACAATATGGAATATGATATATAATAGTTAATAAAGTGTAATTTAGGCGGCTATAAGCTATTTTAC
TTTATGTTAGCGTAATGTAT

Product: AP endonuclease

Products: NA

Alternate protein names: Endonuclease; Xylose Isomerase Domain-Containing Protein TIM Barrel; AP Endonuclease Family 2 Superfamily Protein; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKIGMSSACLYPKVPIEESISVMKSLGFNIGEIFLNTYSEYSEDFIKTLQEQKEENDFLINSIHAFSSVFEPYLFDSYKR
RQRDMLKIFKKVCRAGSLLKANYYTFHGMRRNNLLDLNMDYIIDVYNELNYIANEEGIKLAQENVAWCMSSNIDFLDKLN
EKCNNQLHYTLDIKQAFKIGKDPMEYINVMGNKIVNVHINDRDESNICLLPGKGDVDLKKICCKLKEMGYNNVYTIEVYN
DNYSSYSEIIDSKDFLQNILL

Sequences:

>Translated_261_residues
MKIGMSSACLYPKVPIEESISVMKSLGFNIGEIFLNTYSEYSEDFIKTLQEQKEENDFLINSIHAFSSVFEPYLFDSYKR
RQRDMLKIFKKVCRAGSLLKANYYTFHGMRRNNLLDLNMDYIIDVYNELNYIANEEGIKLAQENVAWCMSSNIDFLDKLN
EKCNNQLHYTLDIKQAFKIGKDPMEYINVMGNKIVNVHINDRDESNICLLPGKGDVDLKKICCKLKEMGYNNVYTIEVYN
DNYSSYSEIIDSKDFLQNILL
>Mature_261_residues
MKIGMSSACLYPKVPIEESISVMKSLGFNIGEIFLNTYSEYSEDFIKTLQEQKEENDFLINSIHAFSSVFEPYLFDSYKR
RQRDMLKIFKKVCRAGSLLKANYYTFHGMRRNNLLDLNMDYIIDVYNELNYIANEEGIKLAQENVAWCMSSNIDFLDKLN
EKCNNQLHYTLDIKQAFKIGKDPMEYINVMGNKIVNVHINDRDESNICLLPGKGDVDLKKICCKLKEMGYNNVYTIEVYN
DNYSSYSEIIDSKDFLQNILL

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30446; Mature: 30446

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGMSSACLYPKVPIEESISVMKSLGFNIGEIFLNTYSEYSEDFIKTLQEQKEENDFLI
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
NSIHAFSSVFEPYLFDSYKRRQRDMLKIFKKVCRAGSLLKANYYTFHGMRRNNLLDLNMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCEEECCHH
YIIDVYNELNYIANEEGIKLAQENVAWCMSSNIDFLDKLNEKCNNQLHYTLDIKQAFKIG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEHHHHHHCC
KDPMEYINVMGNKIVNVHINDRDESNICLLPGKGDVDLKKICCKLKEMGYNNVYTIEVYN
CCHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEC
DNYSSYSEIIDSKDFLQNILL
CCCHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MKIGMSSACLYPKVPIEESISVMKSLGFNIGEIFLNTYSEYSEDFIKTLQEQKEENDFLI
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
NSIHAFSSVFEPYLFDSYKRRQRDMLKIFKKVCRAGSLLKANYYTFHGMRRNNLLDLNMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCEEECCHH
YIIDVYNELNYIANEEGIKLAQENVAWCMSSNIDFLDKLNEKCNNQLHYTLDIKQAFKIG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEHHHHHHCC
KDPMEYINVMGNKIVNVHINDRDESNICLLPGKGDVDLKKICCKLKEMGYNNVYTIEVYN
CCHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEC
DNYSSYSEIIDSKDFLQNILL
CCCHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA