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The map label for this gene is 226950641

Identifier: 226950641

GI number: 226950641

Start: 3663905

End: 3664450

Strand: Reverse

Name: 226950641

Synonym: CLM_3625

Alternate gene names: NA

Gene position: 3664450-3663905 (Counterclockwise)

Preceding gene: 226950642

Following gene: 226950640

Centisome position: 88.19

GC content: 34.43

Gene sequence:

>546_bases
ATGAAAAAATTTATATGTTCAATATGTGGTTATGTTTTTGAAGGAGAGGAAGCACCAGAAAAATGCCCTCAATGTAATGC
ACCAAAGGATAAATTTATAGAAAAGGTAGAAGGAGAAATGGCTTGGGCTGATGAACACAGAATAGGTGTAGCAAAAGATG
TAGATCCAGAAGTTATGGAAGGATTAAGAGCCAACTTTATGGGAGAATGTACAGAAGTAGGAATGTATTTAGCTATGAGT
CGTCAAGCAGATAGAGAAGGATTTCCAGAAGTTGCAGAGGCATATAAAAGAATAGCTTTTGAAGAAGCAGAACATGCTGC
TAAATTTGCTGAATTACTAGGAGAAGTTGTTACAGATAGTACTAAGAAAAACTTAGAAATGAGAGTAGAAGCAGAACACG
GTGCCTGTCAAGGGAAGAAAGATTTAGCAACATTAGCTAAAAAATTAAACTATGATGCTATTCATGATACAGTACACGAA
ATGTGTAAAGATGAAGCTAGACATGGATCAGCATTTAGAGGATTATTAAATAGATATTTTAAATAA

Upstream 100 bases:

>100_bases
GGGTTGATTATTTATAATTACTATTATATAATAATAATTGTTAACAAGGAAAAAATTAATTAAATAAATTTAAATAAATT
TATAGTAGGAGGATGTTAAT

Downstream 100 bases:

>100_bases
AATCCAAATATAATTATAAAAGAGTTACTATTGATTTAGTAGCTTTTTTATTTTTTGTTTTTAGAATTTTGATGAATTAA
TGGAAAATATAAAAAAATAA

Product: rubredoxin/rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKFICSICGYVFEGEEAPEKCPQCNAPKDKFIEKVEGEMAWADEHRIGVAKDVDPEVMEGLRANFMGECTEVGMYLAMS
RQADREGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDSTKKNLEMRVEAEHGACQGKKDLATLAKKLNYDAIHDTVHE
MCKDEARHGSAFRGLLNRYFK

Sequences:

>Translated_181_residues
MKKFICSICGYVFEGEEAPEKCPQCNAPKDKFIEKVEGEMAWADEHRIGVAKDVDPEVMEGLRANFMGECTEVGMYLAMS
RQADREGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDSTKKNLEMRVEAEHGACQGKKDLATLAKKLNYDAIHDTVHE
MCKDEARHGSAFRGLLNRYFK
>Mature_181_residues
MKKFICSICGYVFEGEEAPEKCPQCNAPKDKFIEKVEGEMAWADEHRIGVAKDVDPEVMEGLRANFMGECTEVGMYLAMS
RQADREGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDSTKKNLEMRVEAEHGACQGKKDLATLAKKLNYDAIHDTVHE
MCKDEARHGSAFRGLLNRYFK

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20403; Mature: 20403

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFICSICGYVFEGEEAPEKCPQCNAPKDKFIEKVEGEMAWADEHRIGVAKDVDPEVME
CHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHH
GLRANFMGECTEVGMYLAMSRQADREGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKKNLEMRVEAEHGACQGKKDLATLAKKLNYDAIHDTVHEMCKDEARHGSAFRGLLNRYF
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
K
C
>Mature Secondary Structure
MKKFICSICGYVFEGEEAPEKCPQCNAPKDKFIEKVEGEMAWADEHRIGVAKDVDPEVME
CHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHH
GLRANFMGECTEVGMYLAMSRQADREGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKKNLEMRVEAEHGACQGKKDLATLAKKLNYDAIHDTVHEMCKDEARHGSAFRGLLNRYF
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]