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The map label for this gene is yfmS [H]

Identifier: 226950106

GI number: 226950106

Start: 3055183

End: 3056031

Strand: Reverse

Name: yfmS [H]

Synonym: CLM_3059

Alternate gene names: 226950106

Gene position: 3056031-3055183 (Counterclockwise)

Preceding gene: 226950107

Following gene: 226950105

Centisome position: 73.55

GC content: 30.62

Gene sequence:

>849_bases
ATGGGTGAAAATAGGAGATTTCAAAGTAATGAAGAAATATTAGCAGCTTTTAAACTAGTACTACCTTACATAAATAAAAT
CATTCATGAAGATATGGTGGTAGGTCTTACGGATTTAGAAAAATATGTTGGTTATCATAGAGCTAAAGAATTTGAACTAG
ATTTACCAGAGGGAAAACCTATAAAAGGTATAAAAACCATAGAGGAATGTATTAAATATAAAAAAGAAACCTATGATAAT
ATTCCAAAGGAAGTGTATGGTAGAGCTATAAAAACAATATTCACTCCTATTTATGGCGTAAACAATGAAGTTATAGGTAC
CCTTAGTTCAGGAATAGATTTTGATAATAATAATCAATTAGTAGAAAATGTTCAAAAATTAGTGGAGAATGTTAAACAGG
TAACCGAAAATACTGCTCAAGTATCAGAGGCAGCGGAAAGTTTGGCAAAGTCAGGTCAAAATGCTATTTCTATGGTAGAA
GAATTAAATAATAAGAAAAATGATACTTCCGAAATTCTGGAATTTATAAAGGGTATTGCCACTCAAACTAATTTATTAGG
ACTTAATGCAGCTATAGAAGCTGCAAGAGCAGGGGAATCTGGCCGTGGATTTGCAGTAGTTGCAGGACAGGTTAGAAAAT
TGTCAGATCAATCTCAAGAGGCTGTTAAAAACATCGAAAAAATATTAGATGAAATGAATAATAGTGTAAATGAAATTAAT
AATACCATAGGAAGTGTAGGAGCTATTAGTGAAGAGCAAGCAGCTTCTACAGAGGAAATTTTATCTAGAATAGAAACACT
TAATGAAACTATTAAAAACTTACAAGAATTTGTAGAAAAATATAAATAA

Upstream 100 bases:

>100_bases
ATAATAAGTAAATCGCTTCTATAGATGATGAAAATATATACAAAACACAGAAATCCTATTAGTTAAAAAACAAACCTAAA
CAAAAAAGGGGAGAATAGAA

Downstream 100 bases:

>100_bases
AAGATTATAATAAAGTCCCCACTTAATAATAGCTGGGGACTATTATAATGCTATGTAGCATAGAGTTTTAGAAAAAGTTT
ATTTTATAAATTTTTTATGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYVGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDN
IPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFDNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVE
ELNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK

Sequences:

>Translated_282_residues
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYVGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDN
IPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFDNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVE
ELNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
>Mature_281_residues
GENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYVGYHRAKEFELDLPEGKPIKGIKTIEECIKYKKETYDNI
PKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFDNNNQLVENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEE
LNNKKNDTSEILEFIKGIATQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEINN
TIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=254, Percent_Identity=29.9212598425197, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788195, Length=166, Percent_Identity=33.7349397590361, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI2367378, Length=163, Percent_Identity=31.9018404907975, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789453, Length=181, Percent_Identity=33.7016574585635, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=183, Percent_Identity=32.7868852459016, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 31346; Mature: 31215

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYVGYHRAKEFELDLPEGKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IKGIKTIEECIKYKKETYDNIPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFDNNNQL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
VENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEELNNKKNDTSEILEFIKGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GENRRFQSNEEILAAFKLVLPYINKIIHEDMVVGLTDLEKYVGYHRAKEFELDLPEGKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IKGIKTIEECIKYKKETYDNIPKEVYGRAIKTIFTPIYGVNNEVIGTLSSGIDFDNNNQL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
VENVQKLVENVKQVTENTAQVSEAAESLAKSGQNAISMVEELNNKKNDTSEILEFIKGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TQTNLLGLNAAIEAARAGESGRGFAVVAGQVRKLSDQSQEAVKNIEKILDEMNNSVNEIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTIGSVGAISEEQAASTEEILSRIETLNETIKNLQEFVEKYK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]