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The map label for this gene is rfbP [H]

Identifier: 226950097

GI number: 226950097

Start: 3049393

End: 3050070

Strand: Reverse

Name: rfbP [H]

Synonym: CLM_3050

Alternate gene names: 226950097

Gene position: 3050070-3049393 (Counterclockwise)

Preceding gene: 226950098

Following gene: 226950096

Centisome position: 73.4

GC content: 30.09

Gene sequence:

>678_bases
ATGCAGGAAATAGAAAGAGAATTAGACGATAGTCATATAAAAACTAAAAAACTTGAACTAGTGGAGAATAAATTTTTTTA
TGATTTATTAAAAAGGACCTTTGATTTAGCCAGTTCTTTATGCGGGTTAACAGTTTTTTCTCCTTTGTTTTTAATTATTG
CAATGCTGATTAAATTAGATTCTAAAGGACCAGCATTTTTTTCACATATAAGGTTGGGGAAACAAGGTTCAAAGATAAAA
GTATATAAATTTAGAACTATGAAACCTAATGCTGAAGAATTATTGAAAAACTTGACACCAGAACAAAAACGAGAATTTCA
GGAAAATTTTAAGTTAGAAGATGACCCTAGAATAACAAAAATAGGTAGTTTTTTAAGAAAAAGTAGTTTAGATGAATTAC
CGCAATTATTAAATATATTTATAGGAAATATGACTGTAGTGGGACCTAGGCCCATAGTAGAAAAAGAAATTGAAAAATAT
GGTGAATATGGGGACAAGCTTCTAATGGTTAAGCCGGGACTTACAGGAATGTGGCAGGCTAATGGAAGAAGTGATACTAC
ATATGAAGATAGAGTTGAAATGGATATGTATTACATAGACAATAGAAATTTTTGGCTAGATATTAAGATTATACTTCAAA
CAGCCATAGCAGTAGTTAGGAAAAAAGGAGCAAGATAA

Upstream 100 bases:

>100_bases
ATAATATGACAATAAATTGTAAAATATAATATGATTTCTGATTTCATAGAAATAAGTATATAAAAATGATAAGAAGAAGA
AAGCTAAAGGGAGGGGAATT

Downstream 100 bases:

>100_bases
GAATAATTATACATATAAATAATAGTTTATCAAAAATTTTCATATAAGAGTAGATAAAATACTAGCAAACAAATATTAAT
ACTTTATCAAGGAGGAAAGG

Product: putative undecaprenyl-phosphate galactosephosphotransferase

Products: NA

Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLTVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIEKY
GEYGDKLLMVKPGLTGMWQANGRSDTTYEDRVEMDMYYIDNRNFWLDIKIILQTAIAVVRKKGAR

Sequences:

>Translated_225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLTVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIEKY
GEYGDKLLMVKPGLTGMWQANGRSDTTYEDRVEMDMYYIDNRNFWLDIKIILQTAIAVVRKKGAR
>Mature_225_residues
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLTVFSPLFLIIAMLIKLDSKGPAFFSHIRLGKQGSKIK
VYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITKIGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIEKY
GEYGDKLLMVKPGLTGMWQANGRSDTTYEDRVEMDMYYIDNRNFWLDIKIILQTAIAVVRKKGAR

Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=204, Percent_Identity=39.2156862745098, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: =2.7.8.6 [H]

Molecular weight: Translated: 26177; Mature: 26177

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLTVFSPLFLIIAMLIKLD
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKGPAFFSHIRLGKQGSKIKVYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITK
CCCCHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH
IGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIEKYGEYGDKLLMVKPGLTGMWQA
HHHHHHHCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEC
NGRSDTTYEDRVEMDMYYIDNRNFWLDIKIILQTAIAVVRKKGAR
CCCCCCCHHHHHEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQEIERELDDSHIKTKKLELVENKFFYDLLKRTFDLASSLCGLTVFSPLFLIIAMLIKLD
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKGPAFFSHIRLGKQGSKIKVYKFRTMKPNAEELLKNLTPEQKREFQENFKLEDDPRITK
CCCCHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH
IGSFLRKSSLDELPQLLNIFIGNMTVVGPRPIVEKEIEKYGEYGDKLLMVKPGLTGMWQA
HHHHHHHCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEC
NGRSDTTYEDRVEMDMYYIDNRNFWLDIKIILQTAIAVVRKKGAR
CCCCCCCHHHHHEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]