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The map label for this gene is glf [H]

Identifier: 226950096

GI number: 226950096

Start: 3048188

End: 3049288

Strand: Reverse

Name: glf [H]

Synonym: CLM_3049

Alternate gene names: 226950096

Gene position: 3049288-3048188 (Counterclockwise)

Preceding gene: 226950097

Following gene: 226950095

Centisome position: 73.38

GC content: 26.61

Gene sequence:

>1101_bases
ATGTATGATTATCTTATAGTAGGAGCTGGATTATTTGGCTCTATATTTGCCTATGAGGCAACAAAAAGAGGAAAAAGATG
TTTGGTTATTGATAAAAGAAATCATATTGGTGGAAATATATATTGTGACAATATAGAAGAAATAAATATTCATAAATATG
GAGCTCATATATTTCATACTAGTGATAAAGATATTTGGAATTATATAAACAGATTTATAGAATTTAATAGATTTACTAAT
TCTCCTATAGCAAATTATAAAGGAGAATTATATAATCTTCCTTTTAATATGAATACCTTTAATAAATTATGGGGTGTTAT
TACCCCTAAAGAGGCAAAAGAAGAAATAGAAAAACAAAAAAGAGAAGCAGGAATAAAAGAACCTAAAAATTTAGAAGAAC
AAGCGATTTCGCTAGTAGGTACAGATATATATGAAAAGTTAATTAAAGGATATACAGAAAAGCAATGGGGTAGATCTGCA
ACAGAATTACCTGATTTTATTATAAAAAGGTTACCAGTTAGATTTACTTATGATAATAACTACTTTAATGATACATATCA
GGGAATTCCAATGGGTGGATATAATCCTATTATTGAAAAAATGCTAGAGAATTGTGAAGTAAGATTAAATGTAGATTTCT
TTAAACATAGAAAAGAGTTAGAAGCTATAGCAGAAAAAATAGTTTATACAGGAATGATTGATGAATTTTATGATTATAAA
TATGGAGTTTTAGAATATAGAAGTTTAAGATTTGAAACAGAAGTTTTAGATTTAGATAACTACCAAGGGAATGCTGTTGT
AAATTATACAGATAAAGAAACATCATATACAAGAGTTATAGAACATAAACATTTCGAATTCGGAACACAACAAAAGACAA
TAGTAACTAAAGAATATCCTAGTGAATGGAAAAAAGGCGATGAGCCTTATTATCCAATAAATGATAAAAAAAATATAGGG
TTATATGAGAAATATAATGATTTAGCTATGAAAGAGGATAAAATCTTATTTGGTGGAAGATTGGCAGATTATAAATATTA
TGATATGCACCACATAGTTTATAAAGCTCTTGAAAAAGTAAAAGAGGAGTTTAGAGATTAA

Upstream 100 bases:

>100_bases
AATTATACATATAAATAATAGTTTATCAAAAATTTTCATATAAGAGTAGATAAAATACTAGCAAACAAATATTAATACTT
TATCAAGGAGGAAAGGTTAA

Downstream 100 bases:

>100_bases
TGAATATAAAAATACTTGTAGCAACGCATAAGAAATATAGTATGCCTAAAGAAAATATGTATTTACCAATACATGTTGGA
TGTGAAGGAAAAAAAAATTT

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MYDYLIVGAGLFGSIFAYEATKRGKRCLVIDKRNHIGGNIYCDNIEEINIHKYGAHIFHTSDKDIWNYINRFIEFNRFTN
SPIANYKGELYNLPFNMNTFNKLWGVITPKEAKEEIEKQKREAGIKEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRSA
TELPDFIIKRLPVRFTYDNNYFNDTYQGIPMGGYNPIIEKMLENCEVRLNVDFFKHRKELEAIAEKIVYTGMIDEFYDYK
YGVLEYRSLRFETEVLDLDNYQGNAVVNYTDKETSYTRVIEHKHFEFGTQQKTIVTKEYPSEWKKGDEPYYPINDKKNIG
LYEKYNDLAMKEDKILFGGRLADYKYYDMHHIVYKALEKVKEEFRD

Sequences:

>Translated_366_residues
MYDYLIVGAGLFGSIFAYEATKRGKRCLVIDKRNHIGGNIYCDNIEEINIHKYGAHIFHTSDKDIWNYINRFIEFNRFTN
SPIANYKGELYNLPFNMNTFNKLWGVITPKEAKEEIEKQKREAGIKEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRSA
TELPDFIIKRLPVRFTYDNNYFNDTYQGIPMGGYNPIIEKMLENCEVRLNVDFFKHRKELEAIAEKIVYTGMIDEFYDYK
YGVLEYRSLRFETEVLDLDNYQGNAVVNYTDKETSYTRVIEHKHFEFGTQQKTIVTKEYPSEWKKGDEPYYPINDKKNIG
LYEKYNDLAMKEDKILFGGRLADYKYYDMHHIVYKALEKVKEEFRD
>Mature_366_residues
MYDYLIVGAGLFGSIFAYEATKRGKRCLVIDKRNHIGGNIYCDNIEEINIHKYGAHIFHTSDKDIWNYINRFIEFNRFTN
SPIANYKGELYNLPFNMNTFNKLWGVITPKEAKEEIEKQKREAGIKEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRSA
TELPDFIIKRLPVRFTYDNNYFNDTYQGIPMGGYNPIIEKMLENCEVRLNVDFFKHRKELEAIAEKIVYTGMIDEFYDYK
YGVLEYRSLRFETEVLDLDNYQGNAVVNYTDKETSYTRVIEHKHFEFGTQQKTIVTKEYPSEWKKGDEPYYPINDKKNIG
LYEKYNDLAMKEDKILFGGRLADYKYYDMHHIVYKALEKVKEEFRD

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=361, Percent_Identity=63.7119113573407, Blast_Score=499, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR016040
- InterPro:   IPR001327
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF03275 GLF; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 43438; Mature: 43438

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDYLIVGAGLFGSIFAYEATKRGKRCLVIDKRNHIGGNIYCDNIEEINIHKYGAHIFHT
CCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCEEEEC
SDKDIWNYINRFIEFNRFTNSPIANYKGELYNLPFNMNTFNKLWGVITPKEAKEEIEKQK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHHHHHHHH
REAGIKEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRSATELPDFIIKRLPVRFTYDNN
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCEEEEECCC
YFNDTYQGIPMGGYNPIIEKMLENCEVRLNVDFFKHRKELEAIAEKIVYTGMIDEFYDYK
CCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YGVLEYRSLRFETEVLDLDNYQGNAVVNYTDKETSYTRVIEHKHFEFGTQQKTIVTKEYP
CCHHHHHHHEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCC
SEWKKGDEPYYPINDKKNIGLYEKYNDLAMKEDKILFGGRLADYKYYDMHHIVYKALEKV
HHHCCCCCCCCCCCCCCCCCCHHHHCCHHCCCCCEEECCEECCCEEHHHHHHHHHHHHHH
KEEFRD
HHHHCC
>Mature Secondary Structure
MYDYLIVGAGLFGSIFAYEATKRGKRCLVIDKRNHIGGNIYCDNIEEINIHKYGAHIFHT
CCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCEEEEC
SDKDIWNYINRFIEFNRFTNSPIANYKGELYNLPFNMNTFNKLWGVITPKEAKEEIEKQK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHHHHHHHH
REAGIKEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRSATELPDFIIKRLPVRFTYDNN
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCEEEEECCC
YFNDTYQGIPMGGYNPIIEKMLENCEVRLNVDFFKHRKELEAIAEKIVYTGMIDEFYDYK
CCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YGVLEYRSLRFETEVLDLDNYQGNAVVNYTDKETSYTRVIEHKHFEFGTQQKTIVTKEYP
CCHHHHHHHEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCC
SEWKKGDEPYYPINDKKNIGLYEKYNDLAMKEDKILFGGRLADYKYYDMHHIVYKALEKV
HHHCCCCCCCCCCCCCCCCCCHHHHCCHHCCCCCEEECCEECCCEEHHHHHHHHHHHHHH
KEEFRD
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7517390; 7517391; 9097040; 9278503; 8576037 [H]