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The map label for this gene is ytxB [H]

Identifier: 226950020

GI number: 226950020

Start: 2973436

End: 2974155

Strand: Reverse

Name: ytxB [H]

Synonym: CLM_2973

Alternate gene names: 226950020

Gene position: 2974155-2973436 (Counterclockwise)

Preceding gene: 226950021

Following gene: 226950019

Centisome position: 71.58

GC content: 25.97

Gene sequence:

>720_bases
GTGAAAAAATCTAAAAAAAATATTATAGTTTCTATAATTTTAGTTATTTTATTAGCTTTTTTAATATATTTTTTAAGAAA
TACTATACTGGCTAAAGATGTAAGTGCAGTTTCTATAAAAGAGTATATAAATAGTTATGGTGCTATAGCCCCTATAATTT
ATATAATATTATTTACTTTAGTACCACTTACATTATTTCCAGATTCAATATTAGCTATAGCTGGAGGTATGGCTTTTGGG
ATGGTGGAAGGTAGCGTATATACTATAATAGGTGCTGTTTGTGGAGCATCACTATCTTTTTATATAGCTAGATTTTTAGG
AAGAACTGTAGTTGAAAAATTGATTAGAGGAAAAGGAAAATGGTTTGAGGATGGAGTAGAGAAAAATGGATTTTTGGTTG
TATTTATATTACGACTTATACCTTTAGTTCCTTTTGATATTATAAGCTATGGAACGGGACTTTCAAAAATAAAATTCAAA
GATTTTGTTTTAGCTACTATAGTAGGAATAATTCCAGGTATATTAGTATTTATAAACCTTGGAGATAAAGCTTTAAATAT
TAAATCTAAACAGTTTGTAATATCTGTAGTATTGTTAGTTTTGCTATGTTTAGCTTCTTTTATTATGAAAAAGAAGCTAT
CCTTTAATAAATTACAGAAAAATATAATTAAGAAAGGGGATAGTTATGGATCAAAAGAAAAAGAAGAGTTTAATAATTAA

Upstream 100 bases:

>100_bases
AATTTCTATTGAGTCTTGATTATATTTCAGATTCTCCTTTAAATAAGGGTTACAATTGAGAAATACAGGATAAAATAAAA
ATTTTAATGGAGGCGTTTAT

Downstream 100 bases:

>100_bases
ATTAGGTTTTCTTTTAGGTATAATACTTTTGTATTTCTTAGTTCCTGGTTTTAAAAATGGAGTAAATAAAATAGCTTCGA
TGCTTGCTAGATTAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKSKKNIIVSIILVILLAFLIYFLRNTILAKDVSAVSIKEYINSYGAIAPIIYIILFTLVPLTLFPDSILAIAGGMAFG
MVEGSVYTIIGAVCGASLSFYIARFLGRTVVEKLIRGKGKWFEDGVEKNGFLVVFILRLIPLVPFDIISYGTGLSKIKFK
DFVLATIVGIIPGILVFINLGDKALNIKSKQFVISVVLLVLLCLASFIMKKKLSFNKLQKNIIKKGDSYGSKEKEEFNN

Sequences:

>Translated_239_residues
MKKSKKNIIVSIILVILLAFLIYFLRNTILAKDVSAVSIKEYINSYGAIAPIIYIILFTLVPLTLFPDSILAIAGGMAFG
MVEGSVYTIIGAVCGASLSFYIARFLGRTVVEKLIRGKGKWFEDGVEKNGFLVVFILRLIPLVPFDIISYGTGLSKIKFK
DFVLATIVGIIPGILVFINLGDKALNIKSKQFVISVVLLVLLCLASFIMKKKLSFNKLQKNIIKKGDSYGSKEKEEFNN
>Mature_239_residues
MKKSKKNIIVSIILVILLAFLIYFLRNTILAKDVSAVSIKEYINSYGAIAPIIYIILFTLVPLTLFPDSILAIAGGMAFG
MVEGSVYTIIGAVCGASLSFYIARFLGRTVVEKLIRGKGKWFEDGVEKNGFLVVFILRLIPLVPFDIISYGTGLSKIKFK
DFVLATIVGIIPGILVFINLGDKALNIKSKQFVISVVLLVLLCLASFIMKKKLSFNKLQKNIIKKGDSYGSKEKEEFNN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=240, Percent_Identity=32.5, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87081964, Length=156, Percent_Identity=35.8974358974359, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26398; Mature: 26398

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSKKNIIVSIILVILLAFLIYFLRNTILAKDVSAVSIKEYINSYGAIAPIIYIILFTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VPLTLFPDSILAIAGGMAFGMVEGSVYTIIGAVCGASLSFYIARFLGRTVVEKLIRGKGK
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WFEDGVEKNGFLVVFILRLIPLVPFDIISYGTGLSKIKFKDFVLATIVGIIPGILVFINL
HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GDKALNIKSKQFVISVVLLVLLCLASFIMKKKLSFNKLQKNIIKKGDSYGSKEKEEFNN
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKKSKKNIIVSIILVILLAFLIYFLRNTILAKDVSAVSIKEYINSYGAIAPIIYIILFTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VPLTLFPDSILAIAGGMAFGMVEGSVYTIIGAVCGASLSFYIARFLGRTVVEKLIRGKGK
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WFEDGVEKNGFLVVFILRLIPLVPFDIISYGTGLSKIKFKDFVLATIVGIIPGILVFINL
HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GDKALNIKSKQFVISVVLLVLLCLASFIMKKKLSFNKLQKNIIKKGDSYGSKEKEEFNN
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]