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The map label for this gene is 226950021

Identifier: 226950021

GI number: 226950021

Start: 2974264

End: 2975409

Strand: Reverse

Name: 226950021

Synonym: CLM_2974

Alternate gene names: NA

Gene position: 2975409-2974264 (Counterclockwise)

Preceding gene: 226950022

Following gene: 226950020

Centisome position: 71.61

GC content: 30.19

Gene sequence:

>1146_bases
ATGGATAAAAAAAGTTTTTATATAAAAGATGAAAAAAGAAAAAAATATATAAAAGATATAAAAGAAAAATGTATAGAGTG
TGATCTATGTGTTAAAAATTGTTCTATGTTAAAAGAATTTGGAGGTAATCCTAAAAAAATATTTGGTAGGATACTTGAGG
AGGGGAAGTTTGAAGCTATACTTCCTTATTCCTGTGCTATCTGTGGAAAATGTAGAGAGTTTTGTCCTAAAGATTTAAAT
ATGGCAAAAGCTTTTATGGATCTTAGATTGGAAACTGTAGAGCAAAATAATGGGAGAACTCCTTTAAAAGAGCATAATTC
TGTGCGTATGCATCAAAAATTAGGATTTTCAAAATTGTTTACAAAATATGTAGAAGATAAAAATGTGGAAACTAATAAGG
TAGAGAGAGTATTTTTCCCTGGTTGTACACTTCCAGCTTATAGTCCAGAATTGGTTTTAAAAATATATGAATATTTAAAA
GAAGAATTACCAGGTACCTCTATGCTTTTAGAATGTTGTGGAAAACCCACAGAAATCTTAGGGGAAGAGGAAAAATTTAA
TAGATTATTTAGTAATGTAGAAAAACATATAAGGGATACTGGAGCGGTAGAAGTAATAACTGCCTGTCAAAACTGCTATA
TGATAATGAAAAACTATAGTAAAGATATAAAGGTTAAATCCCTTTGGACAACTTTAGAGGAGATAGGTTTACCAGACAAT
GCTGTAAATAAGGGAGATAATAGTAAAGTGAAGTTTTCTATTCACGATTCTTGTGTTACAAGACATGAAAAAGAAATACA
AAGCAGTATAAGATGGATTATGAAAGAATTAGGCTATGAAATTTTAGAAGGGGATAATACAAAAAATAGGACTAATTGTT
GTGGTACAGGAGGAATGATTCATGCAGTAAACTCTAAGGTATCTAATGTTATGATGAGGGAAGCTGCAAAAAAAACTGGA
CAAGATTATATAATTACTTATTGTGCAGGATGTAGAGAATCCATGATTAAAGGGGGAGCAAAATCACTGCATATATTAGA
CTTAATTTTTGGAGAGAAAATAGTTAACCAGCATAAGGATATAAGAATAACTTCTCCTTTAAAATCTTGGAGTAATAGGC
TGAAAACAAAGAGAATGATAAGGTAA

Upstream 100 bases:

>100_bases
AAAATCCAGATAGAGATATAAAAAATATGGATACCTATGAAAAGATAAAAGAGTATTTAGAATTGGATTTTATGAGCAAT
CTATTAAGTAGGTGGTTTTA

Downstream 100 bases:

>100_bases
AACTTAATAATTTCTATTGAGTCTTGATTATATTTCAGATTCTCCTTTAAATAAGGGTTACAATTGAGAAATACAGGATA
AAATAAAAATTTTAATGGAG

Product: cysteine-rich domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGRILEEGKFEAILPYSCAICGKCREFCPKDLN
MAKAFMDLRLETVEQNNGRTPLKEHNSVRMHQKLGFSKLFTKYVEDKNVETNKVERVFFPGCTLPAYSPELVLKIYEYLK
EELPGTSMLLECCGKPTEILGEEEKFNRLFSNVEKHIRDTGAVEVITACQNCYMIMKNYSKDIKVKSLWTTLEEIGLPDN
AVNKGDNSKVKFSIHDSCVTRHEKEIQSSIRWIMKELGYEILEGDNTKNRTNCCGTGGMIHAVNSKVSNVMMREAAKKTG
QDYIITYCAGCRESMIKGGAKSLHILDLIFGEKIVNQHKDIRITSPLKSWSNRLKTKRMIR

Sequences:

>Translated_381_residues
MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGRILEEGKFEAILPYSCAICGKCREFCPKDLN
MAKAFMDLRLETVEQNNGRTPLKEHNSVRMHQKLGFSKLFTKYVEDKNVETNKVERVFFPGCTLPAYSPELVLKIYEYLK
EELPGTSMLLECCGKPTEILGEEEKFNRLFSNVEKHIRDTGAVEVITACQNCYMIMKNYSKDIKVKSLWTTLEEIGLPDN
AVNKGDNSKVKFSIHDSCVTRHEKEIQSSIRWIMKELGYEILEGDNTKNRTNCCGTGGMIHAVNSKVSNVMMREAAKKTG
QDYIITYCAGCRESMIKGGAKSLHILDLIFGEKIVNQHKDIRITSPLKSWSNRLKTKRMIR
>Mature_381_residues
MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGRILEEGKFEAILPYSCAICGKCREFCPKDLN
MAKAFMDLRLETVEQNNGRTPLKEHNSVRMHQKLGFSKLFTKYVEDKNVETNKVERVFFPGCTLPAYSPELVLKIYEYLK
EELPGTSMLLECCGKPTEILGEEEKFNRLFSNVEKHIRDTGAVEVITACQNCYMIMKNYSKDIKVKSLWTTLEEIGLPDN
AVNKGDNSKVKFSIHDSCVTRHEKEIQSSIRWIMKELGYEILEGDNTKNRTNCCGTGGMIHAVNSKVSNVMMREAAKKTG
QDYIITYCAGCRESMIKGGAKSLHILDLIFGEKIVNQHKDIRITSPLKSWSNRLKTKRMIR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR004017
- InterPro:   IPR001041
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR004489 [H]

Pfam domain/function: PF02754 CCG; PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 43748; Mature: 43748

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGRILEEGKFEAI
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE
LPYSCAICGKCREFCPKDLNMAKAFMDLRLETVEQNNGRTPLKEHNSVRMHQKLGFSKLF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHCCHHHHH
TKYVEDKNVETNKVERVFFPGCTLPAYSPELVLKIYEYLKEELPGTSMLLECCGKPTEIL
HHHHHCCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHC
GEEEKFNRLFSNVEKHIRDTGAVEVITACQNCYMIMKNYSKDIKVKSLWTTLEEIGLPDN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
AVNKGDNSKVKFSIHDSCVTRHEKEIQSSIRWIMKELGYEILEGDNTKNRTNCCGTGGMI
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEE
HAVNSKVSNVMMREAAKKTGQDYIITYCAGCRESMIKGGAKSLHILDLIFGEKIVNQHKD
EHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
IRITSPLKSWSNRLKTKRMIR
EEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKKSFYIKDEKRKKYIKDIKEKCIECDLCVKNCSMLKEFGGNPKKIFGRILEEGKFEAI
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE
LPYSCAICGKCREFCPKDLNMAKAFMDLRLETVEQNNGRTPLKEHNSVRMHQKLGFSKLF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHCCHHHHH
TKYVEDKNVETNKVERVFFPGCTLPAYSPELVLKIYEYLKEELPGTSMLLECCGKPTEIL
HHHHHCCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHC
GEEEKFNRLFSNVEKHIRDTGAVEVITACQNCYMIMKNYSKDIKVKSLWTTLEEIGLPDN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
AVNKGDNSKVKFSIHDSCVTRHEKEIQSSIRWIMKELGYEILEGDNTKNRTNCCGTGGMI
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEE
HAVNSKVSNVMMREAAKKTGQDYIITYCAGCRESMIKGGAKSLHILDLIFGEKIVNQHKD
EHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
IRITSPLKSWSNRLKTKRMIR
EEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA