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The map label for this gene is 226949984

Identifier: 226949984

GI number: 226949984

Start: 2947085

End: 2947552

Strand: Reverse

Name: 226949984

Synonym: CLM_2937

Alternate gene names: NA

Gene position: 2947552-2947085 (Counterclockwise)

Preceding gene: 226949985

Following gene: 226949983

Centisome position: 70.94

GC content: 23.72

Gene sequence:

>468_bases
GTGATTGATATTGCTTTAAAAAAATTGTGCAGGTGTGGAAAAGTAATAGATTATAATAAAAGAATGTGTGATAAATGTAA
GAATAAATATGATAGCAGTAAGAAAGAAAGCTATAAAGAATATAAGAAGAATAGAAAAGATAATAGAGAACAGAAGTTTT
ATTCTAATAAGGAATGGATAACAGTAAGAGATATAGTAAGAAGAAAGTATAATAATGTATGTTTATATAGTTATTATATA
TTACATGAAATTAAATATGTAGATTATATACATCATATTATAGAGCTCAAAGAAGATTGGGATAAGAAATTAGATATAGA
TAATCTTATTCCTTTATCTGATAAAGTCCATAAGATAGTACATAGAACATATGAAAAGAGTGCTAAGGATAAGAAACAAA
TGCAAGAACTATTAAGAGAACTAAAAAGAAAATATGAAAAGGAATTTGGTACTAATTTAAAAAGTTAG

Upstream 100 bases:

>100_bases
ATAATAAAATAATGAAATAAAATTACACAATATAAAATATATTGAAACTATTTTAAACACTCTTAATTGAGTGTTTTTTA
CTATAGAAGAGTAAAAGAAG

Downstream 100 bases:

>100_bases
TGCTTTTTTATTTTTTGAATTAATCCCCCACGGTTAGATTCTTATAAATATTTATTAAAAAGTCCGTGGTGCAGTCTTCA
TTTTACAAAATTCTAAAAAC

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: Bacteriophage Protein; Gp50 Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIDIALKKLCRCGKVIDYNKRMCDKCKNKYDSSKKESYKEYKKNRKDNREQKFYSNKEWITVRDIVRRKYNNVCLYSYYI
LHEIKYVDYIHHIIELKEDWDKKLDIDNLIPLSDKVHKIVHRTYEKSAKDKKQMQELLRELKRKYEKEFGTNLKS

Sequences:

>Translated_155_residues
MIDIALKKLCRCGKVIDYNKRMCDKCKNKYDSSKKESYKEYKKNRKDNREQKFYSNKEWITVRDIVRRKYNNVCLYSYYI
LHEIKYVDYIHHIIELKEDWDKKLDIDNLIPLSDKVHKIVHRTYEKSAKDKKQMQELLRELKRKYEKEFGTNLKS
>Mature_155_residues
MIDIALKKLCRCGKVIDYNKRMCDKCKNKYDSSKKESYKEYKKNRKDNREQKFYSNKEWITVRDIVRRKYNNVCLYSYYI
LHEIKYVDYIHHIIELKEDWDKKLDIDNLIPLSDKVHKIVHRTYEKSAKDKKQMQELLRELKRKYEKEFGTNLKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19141; Mature: 19141

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIALKKLCRCGKVIDYNKRMCDKCKNKYDSSKKESYKEYKKNRKDNREQKFYSNKEWI
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCC
TVRDIVRRKYNNVCLYSYYILHEIKYVDYIHHIIELKEDWDKKLDIDNLIPLSDKVHKIV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
HRTYEKSAKDKKQMQELLRELKRKYEKEFGTNLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDIALKKLCRCGKVIDYNKRMCDKCKNKYDSSKKESYKEYKKNRKDNREQKFYSNKEWI
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCC
TVRDIVRRKYNNVCLYSYYILHEIKYVDYIHHIIELKEDWDKKLDIDNLIPLSDKVHKIV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
HRTYEKSAKDKKQMQELLRELKRKYEKEFGTNLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA