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The map label for this gene is 226949983

Identifier: 226949983

GI number: 226949983

Start: 2946453

End: 2946938

Strand: Reverse

Name: 226949983

Synonym: CLM_2936

Alternate gene names: NA

Gene position: 2946938-2946453 (Counterclockwise)

Preceding gene: 226949984

Following gene: 226949982

Centisome position: 70.92

GC content: 27.37

Gene sequence:

>486_bases
ATGGCACGACCAAAAAAAATGTTAGCAATACAAGAAGGACATCTAGAGAAAAAACAACAAGAAGAAAGAAAATTACAAGA
ACAAATAATACAAACTGGAATGGAACAATTAGAAAAACCTCCAAAATGGTTAAGGGATTCTTTAGCTAAAAAAGAATGGA
AAAGATTAGTTGAACAATTCAAAACTTTAAGTGTAATAAGCAATTTAGATTTAAATAATTTGGGTGCTTATTGTAACGCT
TATTCTAGTTACATAGAAGCTACAAAAGAATTAAAAGGACACCCATTAACTATAGAATACACGAATAAAGGTGGAGCAAC
TAATGTTATAGAAAATCCTCTAATAAAAATACAATTAAAATATTCTGATGAAATGAAAAAATACAGTAGTCTATTAGGAT
TGACTATTGATAGTAGGTTAAAAATAGCAACTCTTAAACTTACAGAAACTAAAAAAGATATTGTAGATGAGTTTGGTGAT
ATTTAA

Upstream 100 bases:

>100_bases
AATATTTATTAAAAAGTCCGTGGTGCAGTCTTCATTTTACAAAATTCTAAAAACCAACGTTTAGGGGGTAAGTATTATTA
ATTGGAAAGGGGTGATTACA

Downstream 100 bases:

>100_bases
GTGACCATTAAAGAAGAATTAATTAGATACTGTAATAATTGTTTAAAGGATGTTTTTGTAAGTAAATTTGAAACATATAT
AAGTTGCGAAAAACATAAAT

Product: phage terminase small subunit, P27 family

Products: NA

Alternate protein names: Phage Terminase; Phage Terminase-Small Subunit; Phage Terminase Like Small Subunit Protein; Bacteriophage Terminase Small Subunit

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MARPKKMLAIQEGHLEKKQQEERKLQEQIIQTGMEQLEKPPKWLRDSLAKKEWKRLVEQFKTLSVISNLDLNNLGAYCNA
YSSYIEATKELKGHPLTIEYTNKGGATNVIENPLIKIQLKYSDEMKKYSSLLGLTIDSRLKIATLKLTETKKDIVDEFGD
I

Sequences:

>Translated_161_residues
MARPKKMLAIQEGHLEKKQQEERKLQEQIIQTGMEQLEKPPKWLRDSLAKKEWKRLVEQFKTLSVISNLDLNNLGAYCNA
YSSYIEATKELKGHPLTIEYTNKGGATNVIENPLIKIQLKYSDEMKKYSSLLGLTIDSRLKIATLKLTETKKDIVDEFGD
I
>Mature_160_residues
ARPKKMLAIQEGHLEKKQQEERKLQEQIIQTGMEQLEKPPKWLRDSLAKKEWKRLVEQFKTLSVISNLDLNNLGAYCNAY
SSYIEATKELKGHPLTIEYTNKGGATNVIENPLIKIQLKYSDEMKKYSSLLGLTIDSRLKIATLKLTETKKDIVDEFGDI

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18540; Mature: 18409

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPKKMLAIQEGHLEKKQQEERKLQEQIIQTGMEQLEKPPKWLRDSLAKKEWKRLVEQF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KTLSVISNLDLNNLGAYCNAYSSYIEATKELKGHPLTIEYTNKGGATNVIENPLIKIQLK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCEEEEEEC
YSDEMKKYSSLLGLTIDSRLKIATLKLTETKKDIVDEFGDI
CCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARPKKMLAIQEGHLEKKQQEERKLQEQIIQTGMEQLEKPPKWLRDSLAKKEWKRLVEQF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KTLSVISNLDLNNLGAYCNAYSSYIEATKELKGHPLTIEYTNKGGATNVIENPLIKIQLK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCEEEEEEC
YSDEMKKYSSLLGLTIDSRLKIATLKLTETKKDIVDEFGDI
CCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA