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The map label for this gene is 226949978

Identifier: 226949978

GI number: 226949978

Start: 2941171

End: 2942403

Strand: Reverse

Name: 226949978

Synonym: CLM_2931

Alternate gene names: NA

Gene position: 2942403-2941171 (Counterclockwise)

Preceding gene: 226949979

Following gene: 226949977

Centisome position: 70.81

GC content: 27.98

Gene sequence:

>1233_bases
ATGACTAAAGTACAAGAATTAATGAATAAAATTGAGGAAACAAAGGCAAAAGCTAAAGGATTAAAAACTGCTGATGAAAT
AAATGCAAAAATAAAAGAAATTGATGATTTAAAAGCTCAACTAAAAATTGCTGAAATGGAAGAATCTGATGAAAAGGCAG
AAATTGAAAATAAAATAAAAGAAGGAAAAATGAAAAATTTAAGTGAGGAAAAGGATGTTACTAATATGGGAAATAAAGTG
ATATATAATGGAAATTTATTTGCAAAAGCAATTGCAGATGCAACATTGAAAGCTAGAAACAAGAAAGGATTTGTATTTAA
TGAAGGGGAACAAAGGGTTATATCTGAACATGTAGGAGAAGATGGTGGTTTTGCAGTACCTGAAGATATAAAAACTGAAA
TAAATAAGAGATTAAGAGATACGACAGATATATCTAATCTAGTTAATTTTGAAAAAGTTTATACTAGAAGTGGACAAAGA
ACATATGAAAAGAGAAAAAAGCAAACTGAATTAACTAATCTTGATGAGTATGGAAAAATACAAGAAGTAGATTATAGACA
ATTAGAGAGAATTTCTTTTAAACTACACGATTGTGCAGGACTTAAAACCATCCCAAATGATTTACTAGAATTTGCAGGAG
AAGGGTTAAAGAATTTTATAATAGAATGGTTAGTGGATAAAGTTAGATTTACTAAAAATATCAAAATACTTTACGGCACT
GGAGGAGAAAATGAAGTACAAGGAATAATGACTTTTAAGGATATAAAAGTTATTGATTTATCAGCAACAGCAACTATAAA
AGATTTTAAAAAGTTAATAAATGTTGAATTACCTTCTTATTATAAGACTTCTGCAACTTGGGTTACTAATCAAGATGGAT
ATAATTTCTTAGATTGCCTTGAGGATAAACAAGGTAATTCTTATTTAAGACCAGATCCTAAGAATGATGAAGTTGATAAA
TTATTAAGAAAAAATGTAGTTGAATTACCAAACGAAGTATTAGAAACTAAGGATGGTAAAATTCCAGTAATTTTAGGTGA
TTTGAAATCTTTATATACATATTATTCTGATGGAGAATATCAGCTTTTATCTACTAATATTGGTGGTGGTTCTTTTGAAT
CTAATACAACTAAAACTAGATTAATCTATAAGATGGATGGGGGAATTGTAGATAAGGATGCTGTAATAATTGCCTATATT
CCTACAACAGTTGTTGAAAAAACTACCAAATAG

Upstream 100 bases:

>100_bases
GCTAGATTAAAATTAGAATTATTATAAAACACGTTGAAAAGATATATACGTGTTATTTTTATGCTTAAAATTAATAAAAA
ATGAAAGGATAGATGTAAAA

Downstream 100 bases:

>100_bases
CTAAAAACTAAATATAAGGATATAAATTAAGTTCCTATATAGGTTCTTTTTTTATGTCCTTTTTTAATAAAGTAGGTGAT
TAGATTGATAGTAACACTAG

Product: phage major capsid protein, HK97 family

Products: NA

Alternate protein names: Head Protein; HK97 Family Phage Capsid Protein; Phage Head Protein; Phage-Related Head Protein; Phage Capsid Protein; Phage-Like Protein; Bacteriophage Capsid Protein; Capsid Protein; Prophage Lp3 Protein; Phage Protein

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTKVQELMNKIEETKAKAKGLKTADEINAKIKEIDDLKAQLKIAEMEESDEKAEIENKIKEGKMKNLSEEKDVTNMGNKV
IYNGNLFAKAIADATLKARNKKGFVFNEGEQRVISEHVGEDGGFAVPEDIKTEINKRLRDTTDISNLVNFEKVYTRSGQR
TYEKRKKQTELTNLDEYGKIQEVDYRQLERISFKLHDCAGLKTIPNDLLEFAGEGLKNFIIEWLVDKVRFTKNIKILYGT
GGENEVQGIMTFKDIKVIDLSATATIKDFKKLINVELPSYYKTSATWVTNQDGYNFLDCLEDKQGNSYLRPDPKNDEVDK
LLRKNVVELPNEVLETKDGKIPVILGDLKSLYTYYSDGEYQLLSTNIGGGSFESNTTKTRLIYKMDGGIVDKDAVIIAYI
PTTVVEKTTK

Sequences:

>Translated_410_residues
MTKVQELMNKIEETKAKAKGLKTADEINAKIKEIDDLKAQLKIAEMEESDEKAEIENKIKEGKMKNLSEEKDVTNMGNKV
IYNGNLFAKAIADATLKARNKKGFVFNEGEQRVISEHVGEDGGFAVPEDIKTEINKRLRDTTDISNLVNFEKVYTRSGQR
TYEKRKKQTELTNLDEYGKIQEVDYRQLERISFKLHDCAGLKTIPNDLLEFAGEGLKNFIIEWLVDKVRFTKNIKILYGT
GGENEVQGIMTFKDIKVIDLSATATIKDFKKLINVELPSYYKTSATWVTNQDGYNFLDCLEDKQGNSYLRPDPKNDEVDK
LLRKNVVELPNEVLETKDGKIPVILGDLKSLYTYYSDGEYQLLSTNIGGGSFESNTTKTRLIYKMDGGIVDKDAVIIAYI
PTTVVEKTTK
>Mature_409_residues
TKVQELMNKIEETKAKAKGLKTADEINAKIKEIDDLKAQLKIAEMEESDEKAEIENKIKEGKMKNLSEEKDVTNMGNKVI
YNGNLFAKAIADATLKARNKKGFVFNEGEQRVISEHVGEDGGFAVPEDIKTEINKRLRDTTDISNLVNFEKVYTRSGQRT
YEKRKKQTELTNLDEYGKIQEVDYRQLERISFKLHDCAGLKTIPNDLLEFAGEGLKNFIIEWLVDKVRFTKNIKILYGTG
GENEVQGIMTFKDIKVIDLSATATIKDFKKLINVELPSYYKTSATWVTNQDGYNFLDCLEDKQGNSYLRPDPKNDEVDKL
LRKNVVELPNEVLETKDGKIPVILGDLKSLYTYYSDGEYQLLSTNIGGGSFESNTTKTRLIYKMDGGIVDKDAVIIAYIP
TTVVEKTTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46527; Mature: 46395

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVQELMNKIEETKAKAKGLKTADEINAKIKEIDDLKAQLKIAEMEESDEKAEIENKIK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHH
EGKMKNLSEEKDVTNMGNKVIYNGNLFAKAIADATLKARNKKGFVFNEGEQRVISEHVGE
HCHHHCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCC
DGGFAVPEDIKTEINKRLRDTTDISNLVNFEKVYTRSGQRTYEKRKKQTELTNLDEYGKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCC
QEVDYRQLERISFKLHDCAGLKTIPNDLLEFAGEGLKNFIIEWLVDKVRFTKNIKILYGT
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEC
GGENEVQGIMTFKDIKVIDLSATATIKDFKKLINVELPSYYKTSATWVTNQDGYNFLDCL
CCCCCCEEEEEEECEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH
EDKQGNSYLRPDPKNDEVDKLLRKNVVELPNEVLETKDGKIPVILGDLKSLYTYYSDGEY
HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCHHHHHHHCCCCCE
QLLSTNIGGGSFESNTTKTRLIYKMDGGIVDKDAVIIAYIPTTVVEKTTK
EEEEECCCCCCCCCCCCEEEEEEEECCCEECCCCEEEEECCHHHHHCCCC
>Mature Secondary Structure 
TKVQELMNKIEETKAKAKGLKTADEINAKIKEIDDLKAQLKIAEMEESDEKAEIENKIK
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHH
EGKMKNLSEEKDVTNMGNKVIYNGNLFAKAIADATLKARNKKGFVFNEGEQRVISEHVGE
HCHHHCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCC
DGGFAVPEDIKTEINKRLRDTTDISNLVNFEKVYTRSGQRTYEKRKKQTELTNLDEYGKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCC
QEVDYRQLERISFKLHDCAGLKTIPNDLLEFAGEGLKNFIIEWLVDKVRFTKNIKILYGT
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEC
GGENEVQGIMTFKDIKVIDLSATATIKDFKKLINVELPSYYKTSATWVTNQDGYNFLDCL
CCCCCCEEEEEEECEEEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH
EDKQGNSYLRPDPKNDEVDKLLRKNVVELPNEVLETKDGKIPVILGDLKSLYTYYSDGEY
HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCHHHHHHHCCCCCE
QLLSTNIGGGSFESNTTKTRLIYKMDGGIVDKDAVIIAYIPTTVVEKTTK
EEEEECCCCCCCCCCCCEEEEEEEECCCEECCCCEEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA