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The map label for this gene is clpP

Identifier: 226949979

GI number: 226949979

Start: 2942477

End: 2943202

Strand: Reverse

Name: clpP

Synonym: CLM_2932

Alternate gene names: NA

Gene position: 2943202-2942477 (Counterclockwise)

Preceding gene: 226949980

Following gene: 226949978

Centisome position: 70.83

GC content: 25.76

Gene sequence:

>726_bases
ATGAGTAAGTTTTATGAATTTAAAAACAAGACGGATAACAATATAGATATATATGTTTATGGTGAAATTATAGGTGGTTC
TAAAAAATGGGATGAATCAGATGTAACATTTAATGATTTTAGAGATAATTTGGAGCGATTGACAGGTAAAGAAACTATAA
ATATGTATATTAATAGCTGTGGTGGAAGTGTGATAGCTACACAAGGCATAATTGCTATGTTACAAAGAGCTAAAGATAAA
GGTGTTACAATTAATGCTACTATAGATGGCTTAGGTGCTTCATGTTCTTCATTTTTACCTTTAATAGCTGACAATGTATA
TGCTTATAATTCTAGTATGCTAATGATACATAAACCTTTTACTTTTGCAATAGGTAATTCTGATGAATTAAAAGCACAAA
TAGAAATGTTAGACAAAATAGAAAACAATGTTATGATGCCAATTTATATGTCTAAAGTTAAAGAAGGAATTACAGAAGAT
TATATTAAAGATTTAGTAGCAAAAGAAACTTGGTTATCTGCTAAGGAAATGTCTAACATTTTTAATATAGAAATATTAGA
AGATAATAAAGAATTAGTTGCTTGTGTAAGAGATAAATCTATTTTGGATAATTATAAAAATATTCCACAACAACTAAAAA
ATAAGTTGCAAAAAGATAATGATAATACACAAAATACAAATGAATTAGAATTAGCGAAAGCTAGATTAAAATTAGAATTA
TTATAA

Upstream 100 bases:

>100_bases
GATACTCATAGAGTTGACTTAAATCATGTTGATATAAAAGTAGCTAATGATTATCAATTAGCGAAAGCAAATTCTAAAAA
TAAGGGTGGTGAAATAGATA

Downstream 100 bases:

>100_bases
AACACGTTGAAAAGATATATACGTGTTATTTTTATGCTTAAAATTAATAAAAAATGAAAGGATAGATGTAAAAATGACTA
AAGTACAAGAATTAATGAAT

Product: Clp protease

Products: NA

Alternate protein names: Clp Protease; ATP-Dependent Clp Protease Proteolytic Subunit; Serine Protease; ATP-Dependent Endopeptidase Clp Proteolytic Subunit ClpP; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; ClpP Protease Family Protein; ATP-Dependent Protease; Prophage; Protease Subunit Of ATP-Dependent Clp Protease; ATP Dependent Clp Protease; Phage-Related Clp Protease; Clp-Like Protease; ATP-Dependent Clp Protease; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Phage Clp-Protease; Clp Protease-Like Protein; Endopeptidase Clp; Phage Portal Protein Lambda Family; ClpP Protease; Protease Subunit Of ATP-Dependent Clp Proteases; ClpP Family Serine Protease; Phage Protease; Peptidase S; Phage Related Protease; Prophage Clp Protease-Like Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSKFYEFKNKTDNNIDIYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSCGGSVIATQGIIAMLQRAKDK
GVTINATIDGLGASCSSFLPLIADNVYAYNSSMLMIHKPFTFAIGNSDELKAQIEMLDKIENNVMMPIYMSKVKEGITED
YIKDLVAKETWLSAKEMSNIFNIEILEDNKELVACVRDKSILDNYKNIPQQLKNKLQKDNDNTQNTNELELAKARLKLEL
L

Sequences:

>Translated_241_residues
MSKFYEFKNKTDNNIDIYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSCGGSVIATQGIIAMLQRAKDK
GVTINATIDGLGASCSSFLPLIADNVYAYNSSMLMIHKPFTFAIGNSDELKAQIEMLDKIENNVMMPIYMSKVKEGITED
YIKDLVAKETWLSAKEMSNIFNIEILEDNKELVACVRDKSILDNYKNIPQQLKNKLQKDNDNTQNTNELELAKARLKLEL
L
>Mature_240_residues
SKFYEFKNKTDNNIDIYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSCGGSVIATQGIIAMLQRAKDKG
VTINATIDGLGASCSSFLPLIADNVYAYNSSMLMIHKPFTFAIGNSDELKAQIEMLDKIENNVMMPIYMSKVKEGITEDY
IKDLVAKETWLSAKEMSNIFNIEILEDNKELVACVRDKSILDNYKNIPQQLKNKLQKDNDNTQNTNELELAKARLKLELL

Specific function: Unknown

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27354; Mature: 27222

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFYEFKNKTDNNIDIYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSC
CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHEEHHHCCC
GGSVIATQGIIAMLQRAKDKGVTINATIDGLGASCSSFLPLIADNVYAYNSSMLMIHKPF
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEECCCEEEEECCE
TFAIGNSDELKAQIEMLDKIENNVMMPIYMSKVKEGITEDYIKDLVAKETWLSAKEMSNI
EEEECCCHHHHHHHHHHHHHHCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCE
FNIEILEDNKELVACVRDKSILDNYKNIPQQLKNKLQKDNDNTQNTNELELAKARLKLEL
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEC
L
C
>Mature Secondary Structure 
SKFYEFKNKTDNNIDIYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSC
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHEEHHHCCC
GGSVIATQGIIAMLQRAKDKGVTINATIDGLGASCSSFLPLIADNVYAYNSSMLMIHKPF
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEECCCEEEEECCE
TFAIGNSDELKAQIEMLDKIENNVMMPIYMSKVKEGITEDYIKDLVAKETWLSAKEMSNI
EEEECCCHHHHHHHHHHHHHHCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCE
FNIEILEDNKELVACVRDKSILDNYKNIPQQLKNKLQKDNDNTQNTNELELAKARLKLEL
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA