Click here to switch to the map view.

The map label for this gene is 226949876

Identifier: 226949876

GI number: 226949876

Start: 2834126

End: 2835490

Strand: Reverse

Name: 226949876

Synonym: CLM_2825

Alternate gene names: NA

Gene position: 2835490-2834126 (Counterclockwise)

Preceding gene: 226949877

Following gene: 226949875

Centisome position: 68.24

GC content: 27.77

Gene sequence:

>1365_bases
ATGATAAATATAAAATTTGGAGTTGAAAAAATGAAAAAGGAAATACTAAAAGTAGAAAGAGGTAGCATAGCAGAGGAACT
TGAAATAGAAGAAGGCGATTTTTTACTGTCTATAAATAATAAAGAAGTTAAAGATATTATCGACTATAAATTTTTAGTTT
GTGATGAATACTTAGAAGTTGAAATAGAAAAAAATAACGGGGAAATTTGGGAACTAGAGATAGAAAAGGATTATGATGAG
GATTTAGGAATAGAATTTAAAGCAGCTATATTAGATGTACCTCAAAGATGCCATAATAATTGCTTATTTTGTTTTATAGA
TCAACTACCAAAAGGTATGAGAGAAACCCTATATTTTAAAGATGATGATTCAAGATTATCTTTTCTTCAAGGAAATTTTC
TTACCCTTACAAATATGAAGGATGAAGACATAGACAGAATAATAAATTATAAAATAAGTCCTATAAATATATCTGTACAT
ACTACAAATCCAGAACTTAGGGTAAAACTTTTAAATAATAGATTTGCAGGTAATTTATATGACAGGATGAAAAAGCTAGC
CCAGGGTGGCATAAAAATGGATTGTCAGGTAGTTTTATGTCCAGGACTTAATAATGGAGAGGAACTAAAAAGAACCATTG
AAGATTTATATGCTCTTTATCCTCAGGTTGAAAATTTAGCAGTAGTTCCAATAGGTGTTACAAAATTTAGAGAAGGATTA
TACCAATTTGAACTTTTTAATAAAGAAACTGCTAATAAAGAATTAGATATGGTAGAGGAATATCAAAACAAATTTATAAA
GGAAATAGGAAAACCTTTTGTAAGATTATCTGATGAATTCTATGTTATAGCAGAAAGAGAAGTGCCTAAAGAAGATTTTT
ATGATGGATTTAAACAATTAGAAGATGGTGTAGGGGTTATAAGGATATTTAGAAATAATATAAAGGATAATGTAAACAAA
CTTTCAGCTAAAGCTAAAGGTAGTTTTTCACTTATAACAGGACAATCTGCTTATAAAGAGGTAATAGAGGCTAGTAAAAT
GATAAATAATCATAGCAATGATATAGATATAGAAGTTATAAAAATAGATAATAATTTTTTTGGAAAGACCATTACTGTAG
CTGGACTTATAACTGCCAAGGATATAATAGAACAAACACAGAAGAAAAATTTAGGAAAGTATGTTATAATTCCAGATGTA
ATGCTTAGAAAAGGATATGAATTAGCAGATATATCCGAACAAGTTTTCTTAGATGATGTAACACTAAAAGAATTAAGCAA
TAGTTTAAAAAGAGAAATTTTAGTATGCGATTATACAGGAGAAGACTTAATAGATATAATAAATGAACATAGCAAGGAGG
AATAA

Upstream 100 bases:

>100_bases
TTAACATTATTAAAAGGATAAAACTATTATTTTTGTATTTTTAAAATTGAATTTCAAGTTGTAAATTGACTAAATTACTA
TATTAATGTAATATAATTTA

Downstream 100 bases:

>100_bases
AAATGGGAAAACCTATAGTTGCAATAGTAGGAAGACCTAATGTAGGTAAATCTACACTATTCAATAAATTAGCAGGAAAA
AGGATAGCTATAGTACAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MINIKFGVEKMKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDE
DLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVH
TTNPELRVKLLNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGL
YQFELFNKETANKELDMVEEYQNKFIKEIGKPFVRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNK
LSAKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDV
MLRKGYELADISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE

Sequences:

>Translated_454_residues
MINIKFGVEKMKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDE
DLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVH
TTNPELRVKLLNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGL
YQFELFNKETANKELDMVEEYQNKFIKEIGKPFVRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNK
LSAKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDV
MLRKGYELADISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE
>Mature_454_residues
MINIKFGVEKMKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEVEIEKNNGEIWELEIEKDYDE
DLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVH
TTNPELRVKLLNNRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGL
YQFELFNKETANKELDMVEEYQNKFIKEIGKPFVRLSDEFYVIAEREVPKEDFYDGFKQLEDGVGVIRIFRNNIKDNVNK
LSAKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVIKIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDV
MLRKGYELADISEQVFLDDVTLKELSNSLKREILVCDYTGEDLIDIINEHSKEE

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52410; Mature: 52410

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIKFGVEKMKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEV
CEEEEHHHHHHHHHHHHHHCCCCHHHCEECCCCEEEEECCCHHHHHHHHHHEEECCEEEE
EIEKNNGEIWELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFK
EEECCCCCEEEEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEE
DDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLY
CCCCCEEEECCCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHH
DRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGL
HHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCH
YQFELFNKETANKELDMVEEYQNKFIKEIGKPFVRLSDEFYVIAEREVPKEDFYDGFKQL
HHEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCCHHHHHHHHHHH
EDGVGVIRIFRNNIKDNVNKLSAKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVI
HCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEE
KIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELADISEQVFLDDV
EECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCHHCCCHHHHCCCH
TLKELSNSLKREILVCDYTGEDLIDIINEHSKEE
HHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MINIKFGVEKMKKEILKVERGSIAEELEIEEGDFLLSINNKEVKDIIDYKFLVCDEYLEV
CEEEEHHHHHHHHHHHHHHCCCCHHHCEECCCCEEEEECCCHHHHHHHHHHEEECCEEEE
EIEKNNGEIWELEIEKDYDEDLGIEFKAAILDVPQRCHNNCLFCFIDQLPKGMRETLYFK
EEECCCCCEEEEEECCCCCCCCCCEEEHHHHHCHHHHCCCEEEEEHHHCCCCHHHCEEEE
DDDSRLSFLQGNFLTLTNMKDEDIDRIINYKISPINISVHTTNPELRVKLLNNRFAGNLY
CCCCCEEEECCCEEEEECCCHHHHHHHHCEEEEEEEEEEEECCCCEEEEEECCCCCCCHH
DRMKKLAQGGIKMDCQVVLCPGLNNGEELKRTIEDLYALYPQVENLAVVPIGVTKFREGL
HHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCH
YQFELFNKETANKELDMVEEYQNKFIKEIGKPFVRLSDEFYVIAEREVPKEDFYDGFKQL
HHEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCCHHHHHHHHHHH
EDGVGVIRIFRNNIKDNVNKLSAKAKGSFSLITGQSAYKEVIEASKMINNHSNDIDIEVI
HCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEE
KIDNNFFGKTITVAGLITAKDIIEQTQKKNLGKYVIIPDVMLRKGYELADISEQVFLDDV
EECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCHHCCCHHHHCCCH
TLKELSNSLKREILVCDYTGEDLIDIINEHSKEE
HHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA