| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949821
Identifier: 226949821
GI number: 226949821
Start: 2775103
End: 2775999
Strand: Reverse
Name: 226949821
Synonym: CLM_2762
Alternate gene names: NA
Gene position: 2775999-2775103 (Counterclockwise)
Preceding gene: 226949822
Following gene: 226949820
Centisome position: 66.81
GC content: 28.87
Gene sequence:
>897_bases ATGATAACAAAATTATTATTATCAGTATTACTAGTTTTAACAAGCTATTTTTTATTTTTCTTTTTAAAGGATTATTTTAA ATCATTAAAGAAGGGTAATTTAGAAGAGAATAATTTTTTTATTGTAGGAATTATAGGTTTAGTGGTAAATTTTTTTGATA CATTAGGTATAGGAAGTTTCGCTCCGTTAACATCTATGCTTAAATTTTTTAAGCAAACAGAGGATAAAGTAATACCAGGA ACATTAAATGTAGGATGTACTGTACCTATGATTTTACAAGCTTTTATATTTATGACAGGTATAAAAGTAGAGCCTGTAAC TTTAATTTCTATGATACTAGCTGCTATGATAGGTTCTTTATTTGGTGCTGAGATAGTATCAAAATTAGATGAGAAAAAAG TGCAATTTTGTATGGGAGTATCCCTTTTAGTTGTAGCTTTAATAATTTTAGCAGGTCAATTAAATTTAATGCCAGCAGGC GGTAATGATATAGGGCTTCATGGTGCTAAGCTAATAATAGCTATAATTGGTAATTTTATTTTAGGCATACTTATGACAGT GGGAATAGGATTGTATGCTCCATGCATGGCTCTAGTTTGTGTGTTAGGTATGAATCCCAAGGTAGCTTTTCCAATAATGA TGGGATCCTGTGCATTTTTATTACCTATGTCTTCAACTAAGTTTGTAAAAAATAATGCCTATGATAAAAAAGCATCTATA TCTATAAGTATATTTGGAGTAGTAGGAGTTTTAATAGCAGCATTTATAGTTAAAGAACTTCCTGTTAGAGCATTAACTTG GATGGTTGTTTGTGTAATAATGTATACTTCTATTACTATGTTTAAAGCTTATTATTCTAAAAAAGAAAGTTATGAAACTA GAGAGGAATTAGCTTAA
Upstream 100 bases:
>100_bases GAGGGAATATTCATCTATTTTAAAAAATTTTTATACCTAATGAAAAGGTTTACCAGTGAATTGAAGACAAAATACTATGG AGAAGATAGGGGGAATATCA
Downstream 100 bases:
>100_bases TAGTATATATAAATAAAATTTTAAAGAGAAAAGTAAAAAAAAAGTATAGTTATTAAATCATATATAATAATGTAGGTTTT TATTTTTTTTATAAAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MITKLLLSVLLVLTSYFLFFFLKDYFKSLKKGNLEENNFFIVGIIGLVVNFFDTLGIGSFAPLTSMLKFFKQTEDKVIPG TLNVGCTVPMILQAFIFMTGIKVEPVTLISMILAAMIGSLFGAEIVSKLDEKKVQFCMGVSLLVVALIILAGQLNLMPAG GNDIGLHGAKLIIAIIGNFILGILMTVGIGLYAPCMALVCVLGMNPKVAFPIMMGSCAFLLPMSSTKFVKNNAYDKKASI SISIFGVVGVLIAAFIVKELPVRALTWMVVCVIMYTSITMFKAYYSKKESYETREELA
Sequences:
>Translated_298_residues MITKLLLSVLLVLTSYFLFFFLKDYFKSLKKGNLEENNFFIVGIIGLVVNFFDTLGIGSFAPLTSMLKFFKQTEDKVIPG TLNVGCTVPMILQAFIFMTGIKVEPVTLISMILAAMIGSLFGAEIVSKLDEKKVQFCMGVSLLVVALIILAGQLNLMPAG GNDIGLHGAKLIIAIIGNFILGILMTVGIGLYAPCMALVCVLGMNPKVAFPIMMGSCAFLLPMSSTKFVKNNAYDKKASI SISIFGVVGVLIAAFIVKELPVRALTWMVVCVIMYTSITMFKAYYSKKESYETREELA >Mature_298_residues MITKLLLSVLLVLTSYFLFFFLKDYFKSLKKGNLEENNFFIVGIIGLVVNFFDTLGIGSFAPLTSMLKFFKQTEDKVIPG TLNVGCTVPMILQAFIFMTGIKVEPVTLISMILAAMIGSLFGAEIVSKLDEKKVQFCMGVSLLVVALIILAGQLNLMPAG GNDIGLHGAKLIIAIIGNFILGILMTVGIGLYAPCMALVCVLGMNPKVAFPIMMGSCAFLLPMSSTKFVKNNAYDKKASI SISIFGVVGVLIAAFIVKELPVRALTWMVVCVIMYTSITMFKAYYSKKESYETREELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32506; Mature: 32506
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKLLLSVLLVLTSYFLFFFLKDYFKSLKKGNLEENNFFIVGIIGLVVNFFDTLGIGSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCH APLTSMLKFFKQTEDKVIPGTLNVGCTVPMILQAFIFMTGIKVEPVTLISMILAAMIGSL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FGAEIVSKLDEKKVQFCMGVSLLVVALIILAGQLNLMPAGGNDIGLHGAKLIIAIIGNFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH LGILMTVGIGLYAPCMALVCVLGMNPKVAFPIMMGSCAFLLPMSSTKFVKNNAYDKKASI HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHEECCCCCHHHHCCCCCCHHEE SISIFGVVGVLIAAFIVKELPVRALTWMVVCVIMYTSITMFKAYYSKKESYETREELA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITKLLLSVLLVLTSYFLFFFLKDYFKSLKKGNLEENNFFIVGIIGLVVNFFDTLGIGSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCH APLTSMLKFFKQTEDKVIPGTLNVGCTVPMILQAFIFMTGIKVEPVTLISMILAAMIGSL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FGAEIVSKLDEKKVQFCMGVSLLVVALIILAGQLNLMPAGGNDIGLHGAKLIIAIIGNFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH LGILMTVGIGLYAPCMALVCVLGMNPKVAFPIMMGSCAFLLPMSSTKFVKNNAYDKKASI HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHEECCCCCHHHHCCCCCCHHEE SISIFGVVGVLIAAFIVKELPVRALTWMVVCVIMYTSITMFKAYYSKKESYETREELA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA