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The map label for this gene is tsr [C]

Identifier: 226949822

GI number: 226949822

Start: 2776309

End: 2778327

Strand: Reverse

Name: tsr [C]

Synonym: CLM_2763

Alternate gene names: 226949822

Gene position: 2778327-2776309 (Counterclockwise)

Preceding gene: 226949823

Following gene: 226949821

Centisome position: 66.86

GC content: 28.43

Gene sequence:

>2019_bases
TTGAAAAAACTGTCCTTTAAAATGAAATTATTAATTACGATTTTACCAGTTGTAATAATTGGAATGTCAATTTTGAGTTT
TACAACATTTTATGAATTTAGAAAAAATATTGAAAATGAACTTATAAATAATAAATTGGAGGAAGGGAAAAAACTAACTG
AGAGTATAAACAATTGGTTAGAAGGAAAGCTTTTAGAAGTAAGAAGTTCTGCTAATACACCTACGGCAAAACTAATAGAA
ACAGATGTTTCTGCTGTAGATAATTTTAATGCAGAAAGAATTAAATTTTTAGAAAAAAATTATCCAGGAGAATATGACAA
TGCAGCAGCAACTTTATTTAATAATGATGGTAAATCTAGAGCTCAATATTCAAATGGAAAGTTTGTAAATGGTGATGTAT
CAGAAAAAACATGGTACAAGGATTTAATGAGTGGGGTACCATATAATATATCTAATCCTGTAATATCAAAGGGAACTGGT
AAAACTTTGGTTGTAATAGGAGTTCCAATTAAAAACAAATCAGAAAAAACAATAGGAACAATGATATCTGCTGTGAATCT
TTTACATATTAAAGAAAAAGTTAAGGAATTTAAATTTGGTGAAAAAGGATATAGTTTATTAATTGGAAAGGATGGAACTA
TTCTTGAACATCCAGATAAGTCATTAGTAATGCAAAAAAAAATATCAGAAATAAAAGATGAAAATATACAATCATTAGGA
AAAGAAATGATGGAAAATAAATCAGGTGTATTTAGATTTGGAAGTGGAGATAATAAATCGATCGTATTTTATAATAAAGT
TCCTCTATCGGGGTGGAATGTAGCAAGTGTTGTGTCTGAAAAGGAATTGTTCGCTCCTTTAAATAAATTAATGTTAACAT
TAATTTTAATAACAATAGTAATTGTATTGATTGTTGCAACAGTAATTGTACTTATAGCAAAACAAATCACATTACCATTA
ACTAAGTTATCTGATCTTGCAGAAGAAATAGCAGAAGGAAATCTTACAAATAAATTAGAAGTTCATGGGCAAGATGAAAT
TTCTAAGGTGACAAAAGCACTAAATAATACAGTTTTAAAGCTTAAAAAAATGATAGGTGATATAAGTAGTTCGGCTAATG
ATGTTATGGTAATATCTAATGGTTTAGCATCATCAACAAGTGAATCATTAAAGGGAAATGAAGAAGTTTCACGAAGTATG
CAAGAAATAGCCACAGGGGCTGTATCTCAGGCAGAAGGGGCAAGCAAAGCATCTATTATAACAAGAGAATTAGTTGAAGA
TATAAATGAAATATCTAAAAAATGTAATTATATGATTAACATAGTAGAAAAATCAACTAATAGAAGCACAAAAGTTTCAC
AAGGAGTCCAACAAACTGTAGATAGTATAAAGAACATAGCTACAACAAATAAACATAATGTTGAAGAAATTCAAAATTTA
TTAAATCAATCTAAAGAAATAGGACAAATTGTTGATGTAATAAGTGATATATCTGAACAAACTAATCTCTTATCACTTAA
TGCAGCTATTGAAGCTGCTAGGGCTGGTGCACAAGGTAGAGGATTTGCTGTAGTCGCAGATGAGGTGAGGAAATTAGCAG
AACAGTCAAGTAATTCTTCAAAAAGGATAGTAGAGCTTATTAATGGAATTCAAAAACAAATTGAAATCATATCAAATAAA
ATGAATTCTGGAACAAGTGAAGTTATGCATGGAGTTAAAATGGCAATATTAATTGGTAATGATTTTGAAGAAATAGAGAA
AGTATTTAATGAAGTTAATAATATTGTATCAGAGGTATCAGAGTCTACTAATATAATGGAAAAAAAAGTAAATACTACAG
CTGATATTATAAATAATGTTGCAGCTGTAACAGAAGAGAATTCAGCAGCTACAGAAGAAGTCACTGCATCAAATGAAGAG
CAAATTGCTTTTATGCATCAAATTGTAGACTCAACTTATACATTAGAAGAATTAGTTAAAAAACTTAAGGATACAGTATA
TAAATTTAAATTATCTTAG

Upstream 100 bases:

>100_bases
TTTTTTATAATAGATGTAACTTTATAAGTTACATCTTCTAAATAATTTTATAAATTGTTACAAATTAATTACCATTGGAA
TTACGGGAGTGATGAAAATA

Downstream 100 bases:

>100_bases
ATAGAATTAAAAGTAATTTATATAGAAAGCTTATAATCTTACAAAATAAAGATTATAAGCTTTTTTTATTAAATCTGTTA
GAAATATCTACAAAAATAGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MKKLSFKMKLLITILPVVIIGMSILSFTTFYEFRKNIENELINNKLEEGKKLTESINNWLEGKLLEVRSSANTPTAKLIE
TDVSAVDNFNAERIKFLEKNYPGEYDNAAATLFNNDGKSRAQYSNGKFVNGDVSEKTWYKDLMSGVPYNISNPVISKGTG
KTLVVIGVPIKNKSEKTIGTMISAVNLLHIKEKVKEFKFGEKGYSLLIGKDGTILEHPDKSLVMQKKISEIKDENIQSLG
KEMMENKSGVFRFGSGDNKSIVFYNKVPLSGWNVASVVSEKELFAPLNKLMLTLILITIVIVLIVATVIVLIAKQITLPL
TKLSDLAEEIAEGNLTNKLEVHGQDEISKVTKALNNTVLKLKKMIGDISSSANDVMVISNGLASSTSESLKGNEEVSRSM
QEIATGAVSQAEGASKASIITRELVEDINEISKKCNYMINIVEKSTNRSTKVSQGVQQTVDSIKNIATTNKHNVEEIQNL
LNQSKEIGQIVDVISDISEQTNLLSLNAAIEAARAGAQGRGFAVVADEVRKLAEQSSNSSKRIVELINGIQKQIEIISNK
MNSGTSEVMHGVKMAILIGNDFEEIEKVFNEVNNIVSEVSESTNIMEKKVNTTADIINNVAAVTEENSAATEEVTASNEE
QIAFMHQIVDSTYTLEELVKKLKDTVYKFKLS

Sequences:

>Translated_672_residues
MKKLSFKMKLLITILPVVIIGMSILSFTTFYEFRKNIENELINNKLEEGKKLTESINNWLEGKLLEVRSSANTPTAKLIE
TDVSAVDNFNAERIKFLEKNYPGEYDNAAATLFNNDGKSRAQYSNGKFVNGDVSEKTWYKDLMSGVPYNISNPVISKGTG
KTLVVIGVPIKNKSEKTIGTMISAVNLLHIKEKVKEFKFGEKGYSLLIGKDGTILEHPDKSLVMQKKISEIKDENIQSLG
KEMMENKSGVFRFGSGDNKSIVFYNKVPLSGWNVASVVSEKELFAPLNKLMLTLILITIVIVLIVATVIVLIAKQITLPL
TKLSDLAEEIAEGNLTNKLEVHGQDEISKVTKALNNTVLKLKKMIGDISSSANDVMVISNGLASSTSESLKGNEEVSRSM
QEIATGAVSQAEGASKASIITRELVEDINEISKKCNYMINIVEKSTNRSTKVSQGVQQTVDSIKNIATTNKHNVEEIQNL
LNQSKEIGQIVDVISDISEQTNLLSLNAAIEAARAGAQGRGFAVVADEVRKLAEQSSNSSKRIVELINGIQKQIEIISNK
MNSGTSEVMHGVKMAILIGNDFEEIEKVFNEVNNIVSEVSESTNIMEKKVNTTADIINNVAAVTEENSAATEEVTASNEE
QIAFMHQIVDSTYTLEELVKKLKDTVYKFKLS
>Mature_672_residues
MKKLSFKMKLLITILPVVIIGMSILSFTTFYEFRKNIENELINNKLEEGKKLTESINNWLEGKLLEVRSSANTPTAKLIE
TDVSAVDNFNAERIKFLEKNYPGEYDNAAATLFNNDGKSRAQYSNGKFVNGDVSEKTWYKDLMSGVPYNISNPVISKGTG
KTLVVIGVPIKNKSEKTIGTMISAVNLLHIKEKVKEFKFGEKGYSLLIGKDGTILEHPDKSLVMQKKISEIKDENIQSLG
KEMMENKSGVFRFGSGDNKSIVFYNKVPLSGWNVASVVSEKELFAPLNKLMLTLILITIVIVLIVATVIVLIAKQITLPL
TKLSDLAEEIAEGNLTNKLEVHGQDEISKVTKALNNTVLKLKKMIGDISSSANDVMVISNGLASSTSESLKGNEEVSRSM
QEIATGAVSQAEGASKASIITRELVEDINEISKKCNYMINIVEKSTNRSTKVSQGVQQTVDSIKNIATTNKHNVEEIQNL
LNQSKEIGQIVDVISDISEQTNLLSLNAAIEAARAGAQGRGFAVVADEVRKLAEQSSNSSKRIVELINGIQKQIEIISNK
MNSGTSEVMHGVKMAILIGNDFEEIEKVFNEVNNIVSEVSESTNIMEKKVNTTADIINNVAAVTEENSAATEEVTASNEE
QIAFMHQIVDSTYTLEELVKKLKDTVYKFKLS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=350, Percent_Identity=26.8571428571429, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787690, Length=373, Percent_Identity=26.2734584450402, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1788194, Length=350, Percent_Identity=28.2857142857143, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789453, Length=372, Percent_Identity=25.8064516129032, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788195, Length=328, Percent_Identity=26.8292682926829, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73949; Mature: 73949

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFKMKLLITILPVVIIGMSILSFTTFYEFRKNIENELINNKLEEGKKLTESINNWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKLLEVRSSANTPTAKLIETDVSAVDNFNAERIKFLEKNYPGEYDNAAATLFNNDGKSR
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCH
AQYSNGKFVNGDVSEKTWYKDLMSGVPYNISNPVISKGTGKTLVVIGVPIKNKSEKTIGT
HHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
MISAVNLLHIKEKVKEFKFGEKGYSLLIGKDGTILEHPDKSLVMQKKISEIKDENIQSLG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
KEMMENKSGVFRFGSGDNKSIVFYNKVPLSGWNVASVVSEKELFAPLNKLMLTLILITIV
HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLIVATVIVLIAKQITLPLTKLSDLAEEIAEGNLTNKLEVHGQDEISKVTKALNNTVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHH
LKKMIGDISSSANDVMVISNGLASSTSESLKGNEEVSRSMQEIATGAVSQAEGASKASII
HHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
TRELVEDINEISKKCNYMINIVEKSTNRSTKVSQGVQQTVDSIKNIATTNKHNVEEIQNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LNQSKEIGQIVDVISDISEQTNLLSLNAAIEAARAGAQGRGFAVVADEVRKLAEQSSNSS
HHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCH
KRIVELINGIQKQIEIISNKMNSGTSEVMHGVKMAILIGNDFEEIEKVFNEVNNIVSEVS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH
ESTNIMEKKVNTTADIINNVAAVTEENSAATEEVTASNEEQIAFMHQIVDSTYTLEELVK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH
KLKDTVYKFKLS
HHHHHHHHHCCC
>Mature Secondary Structure
MKKLSFKMKLLITILPVVIIGMSILSFTTFYEFRKNIENELINNKLEEGKKLTESINNWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKLLEVRSSANTPTAKLIETDVSAVDNFNAERIKFLEKNYPGEYDNAAATLFNNDGKSR
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCH
AQYSNGKFVNGDVSEKTWYKDLMSGVPYNISNPVISKGTGKTLVVIGVPIKNKSEKTIGT
HHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
MISAVNLLHIKEKVKEFKFGEKGYSLLIGKDGTILEHPDKSLVMQKKISEIKDENIQSLG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
KEMMENKSGVFRFGSGDNKSIVFYNKVPLSGWNVASVVSEKELFAPLNKLMLTLILITIV
HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLIVATVIVLIAKQITLPLTKLSDLAEEIAEGNLTNKLEVHGQDEISKVTKALNNTVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHH
LKKMIGDISSSANDVMVISNGLASSTSESLKGNEEVSRSMQEIATGAVSQAEGASKASII
HHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
TRELVEDINEISKKCNYMINIVEKSTNRSTKVSQGVQQTVDSIKNIATTNKHNVEEIQNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LNQSKEIGQIVDVISDISEQTNLLSLNAAIEAARAGAQGRGFAVVADEVRKLAEQSSNSS
HHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCH
KRIVELINGIQKQIEIISNKMNSGTSEVMHGVKMAILIGNDFEEIEKVFNEVNNIVSEVS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH
ESTNIMEKKVNTTADIINNVAAVTEENSAATEEVTASNEEQIAFMHQIVDSTYTLEELVK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH
KLKDTVYKFKLS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA